G360720


Basic Information

Item Value
gene id G360720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4763321 ~ 4763928 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409828
AATCTGAGGTGCTTCCATCGCTCTGTATAATCAGCAGTGATTAAAGGGATGGACACTTCTGCTGAGCACTGGAGTAACACTGGAGGACtgctgtgtgggttagtggtagtagtgtagactagttaacctaaatccctgtgtgggttagtggtagtagtgtagactagttaacctacatccctgtgtgggttagtggtagtagtgtagactagttaacctaaatccctgtgtgggttagtggtagtagtgtagactagttaacctaaatccctgtgtgggttagtggtagtagtgtagacaagttaacctaaatccctgtgtgggttagtggtagtagtgtaggcTAGTTACCTGattccctgtgtgggttagtggtagtagtgtagactagttacctgattccctgtgtgggttagtggtagtagtgtagactagttaacctaaatcgctgtgtgggttagtggtagtagtgtagactagttacctgattccctgtgtgggttagtggtagtagtgtagactagttaacctaaatcgctgtgtgggttagtggtagtagtgtagactagttacctgattccctgtgtgggttagtggtagtagtgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409828 True 608 lncRNA 0.45 1 4763321 4763928

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 92736 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 164545 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1128206 3547948 ~ 3635115 (+)
musk musk coding upstream 1434055 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1614731 3140042 ~ 3148590 (+)
tcf4 tcf4 coding downstream 144531 4908459 ~ 5339341 (+)
LOC110524934 LOC106572350 coding downstream 653540 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 813086 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 908721 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1724474 6488402 ~ 6555494 (+)
G360718 NA non-coding upstream 1414 4761634 ~ 4761907 (+)
G360707 NA non-coding upstream 15852 4746991 ~ 4747469 (+)
G360699 NA non-coding upstream 28308 4734792 ~ 4735013 (+)
G360697 NA non-coding upstream 29246 4733356 ~ 4734075 (+)
G360696 NA non-coding upstream 30173 4732934 ~ 4733148 (+)
G360722 NA non-coding downstream 8532 4772460 ~ 4772913 (+)
G360723 NA non-coding downstream 9186 4773114 ~ 4774042 (+)
G360730 NA non-coding downstream 15757 4779685 ~ 4779907 (+)
G360735 NA non-coding downstream 20755 4784683 ~ 4784951 (+)
G360743 NA non-coding downstream 46933 4810861 ~ 4811252 (+)
G360276 sync other upstream 115321 4639016 ~ 4648000 (+)
G360287 NA other upstream 215465 4547035 ~ 4547856 (+)
G360261 NA other upstream 343252 4419741 ~ 4420069 (+)
G360234 NA other upstream 417804 4344082 ~ 4345517 (+)
G360121 NA other upstream 751965 4008748 ~ 4011356 (+)
G360985 NA other downstream 532942 5296870 ~ 5299403 (+)
G361671 NA other downstream 1039900 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2421998 7185926 ~ 7189819 (+)
G362554 NA other downstream 2926512 7690440 ~ 7692514 (+)
G362662 NA other downstream 3154994 7918922 ~ 7919565 (+)

Expression


Co-expression Network