G360721



Basic Information


Item Value
gene id G360721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4763499 ~ 4763723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU409829
ggaatcaggtaactagtctacactactaccactaacccacacagggaatCAGGTAACTAgcctacactactaccactaacccacacagggatttaggttaacttgtctacactactaccactaacccacacagggatttaggttaactagtctacactactaccactaacccacacagggatttaggttaactagtctacactactaccactaacccacacaggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU409829 True 225 lncRNA 0.44 1 4763499 4763723

Neighbor


gene id symbol gene type direction distance location
nars1 sync coding downstream 115547 4639020 ~ 4647952 (-)
fech fech coding downstream 125368 4615001 ~ 4638131 (-)
LOC110513199 dcc coding downstream 345968 3782114 ~ 4417531 (-)
LOC110523109 lppr1 coding downstream 1093626 3644170 ~ 3669873 (-)
LOC110524935 rab27b coding upstream 707306 5471029 ~ 5564365 (-)
LOC110523123 LOC106572171 coding upstream 1181441 5945164 ~ 5954687 (-)
LOC110523124 wdr7 coding upstream 1330246 6093969 ~ 6436847 (-)
LOC110524940 LOC106572087 coding upstream 1673543 6437266 ~ 6484290 (-)
LOC110523127 LOC106572117 coding upstream 1741658 6505381 ~ 6510017 (-)
G360719 NA non-coding downstream 446 4762850 ~ 4763053 (-)
G360713 NA non-coding downstream 11447 4751721 ~ 4752052 (-)
G360708 NA non-coding downstream 15226 4747648 ~ 4748273 (-)
G360706 NA non-coding downstream 18771 4744522 ~ 4744728 (-)
G360695 NA non-coding downstream 31183 4731961 ~ 4732316 (-)
G360729 NA non-coding upstream 12500 4776223 ~ 4776902 (-)
G360742 NA non-coding upstream 46905 4810628 ~ 4810830 (-)
G360744 NA non-coding upstream 47185 4810908 ~ 4811359 (-)
G360749 NA non-coding upstream 52939 4816662 ~ 4816885 (-)
G360757 NA non-coding upstream 59284 4823007 ~ 4823405 (-)
G360703 NA other downstream 23797 4738312 ~ 4739702 (-)
G360610 NA other downstream 212572 4550346 ~ 4550927 (-)
G360532 NA other downstream 463474 4299392 ~ 4300025 (-)
G360345 NA other downstream 1014781 3748236 ~ 3748718 (-)
G361170 NA other upstream 316855 5080578 ~ 5081868 (-)
G363470 LOC106572095 other upstream 1779952 6543675 ~ 6554715 (-)
LOC110524941 LOC106572051 other upstream 1838282 6562531 ~ 6726634 (-)
G364322 NA other upstream 3539544 8303267 ~ 8304183 (-)

Expression



Co-expression Network