Gene
RNA
| Item | Value |
|---|---|
| gene id | G360782 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 4866875 ~ 4872274 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ribosomally synthesized cyclic peptide ustiloxin B precursosr-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU409894 | True | 235 | lncRNA | 0.34 | 3 | 4866875 | 4872274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523121 | LOC106572199 | coding | upstream | 196290 | 4654146 ~ 4670585 (+) |
| LOC110523122 | onecut2 | coding | upstream | 268099 | 4561350 ~ 4598776 (+) |
| grin3a | LOC106572512 | coding | upstream | 1231760 | 3547948 ~ 3635115 (+) |
| musk | musk | coding | upstream | 1537609 | 3258931 ~ 3329266 (+) |
| si:busm1-57f23.1 | LOC106572555 | coding | upstream | 1718285 | 3140042 ~ 3148590 (+) |
| tcf4 | tcf4 | coding | downstream | 36185 | 4908459 ~ 5339341 (+) |
| LOC110524934 | LOC106572350 | coding | downstream | 545194 | 5417468 ~ 5458865 (+) |
| LOC110524936 | NA | coding | downstream | 704740 | 5577014 ~ 5577940 (+) |
| LOC110522836 | LOC105008486 | coding | downstream | 800375 | 5672649 ~ 5760948 (+) |
| LOC110523126 | LOC106572095 | coding | downstream | 1616128 | 6488402 ~ 6555494 (+) |
| G360781 | NA | non-coding | upstream | 508 | 4865335 ~ 4866367 (+) |
| G360766 | NA | non-coding | upstream | 23172 | 4839259 ~ 4843703 (+) |
| G360755 | NA | non-coding | upstream | 44949 | 4821653 ~ 4821926 (+) |
| G360751 | NA | non-coding | upstream | 48764 | 4817848 ~ 4818111 (+) |
| G360743 | NA | non-coding | upstream | 55623 | 4810861 ~ 4811252 (+) |
| G360784 | NA | non-coding | downstream | 258 | 4872532 ~ 4877069 (+) |
| G360786 | NA | non-coding | downstream | 3262 | 4875536 ~ 4876115 (+) |
| G360813 | NA | non-coding | downstream | 57076 | 4929350 ~ 4930245 (+) |
| G360842 | NA | non-coding | downstream | 108858 | 4981132 ~ 4981584 (+) |
| G360848 | NA | non-coding | downstream | 124182 | 4996456 ~ 4997278 (+) |
| G360276 | sync | other | upstream | 218875 | 4639016 ~ 4648000 (+) |
| G360287 | NA | other | upstream | 319019 | 4547035 ~ 4547856 (+) |
| G360261 | NA | other | upstream | 446806 | 4419741 ~ 4420069 (+) |
| G360234 | NA | other | upstream | 521358 | 4344082 ~ 4345517 (+) |
| G360121 | NA | other | upstream | 855519 | 4008748 ~ 4011356 (+) |
| G360985 | NA | other | downstream | 424596 | 5296870 ~ 5299403 (+) |
| G361671 | NA | other | downstream | 931554 | 5803828 ~ 5927926 (+) |
| G362297 | zbtb43 | other | downstream | 2313652 | 7185926 ~ 7189819 (+) |
| G362554 | NA | other | downstream | 2818166 | 7690440 ~ 7692514 (+) |
| G362662 | NA | other | downstream | 3046648 | 7918922 ~ 7919565 (+) |
