G360842


Basic Information

Item Value
gene id G360842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 4981132 ~ 4981584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU409977
gctctggtctaaagtagtgcactatatagggaatagggttctataggtgctctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaatgtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgcactatgtagggaatagggttctatagggctctggtctaatgtagtggactatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409977 True 217 lncRNA 0.42 2 4981132 4981584

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 310547 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 382356 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1346017 3547948 ~ 3635115 (+)
musk musk coding upstream 1651866 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1832542 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 435884 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 595430 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 691065 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1506818 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 2020868 7002452 ~ 7031982 (+)
G360813 NA non-coding upstream 50887 4929350 ~ 4930245 (+)
G360784 NA non-coding upstream 104063 4872532 ~ 4877069 (+)
G360786 NA non-coding upstream 105017 4875536 ~ 4876115 (+)
G360782 NA non-coding upstream 108858 4866875 ~ 4872274 (+)
G360781 NA non-coding upstream 114765 4865335 ~ 4866367 (+)
G360848 NA non-coding downstream 14872 4996456 ~ 4997278 (+)
G360851 NA non-coding downstream 21031 5002615 ~ 5003303 (+)
G360858 NA non-coding downstream 29790 5011374 ~ 5015669 (+)
G360864 NA non-coding downstream 45901 5027485 ~ 5028257 (+)
G360869 NA non-coding downstream 50563 5032147 ~ 5032660 (+)
G360276 sync other upstream 333132 4639016 ~ 4648000 (+)
G360287 NA other upstream 433276 4547035 ~ 4547856 (+)
G360261 NA other upstream 561063 4419741 ~ 4420069 (+)
G360234 NA other upstream 635615 4344082 ~ 4345517 (+)
G360121 NA other upstream 969776 4008748 ~ 4011356 (+)
G360985 NA other downstream 315286 5296870 ~ 5299403 (+)
G361671 NA other downstream 822244 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2204342 7185926 ~ 7189819 (+)
G362554 NA other downstream 2708856 7690440 ~ 7692514 (+)
G362662 NA other downstream 2937338 7918922 ~ 7919565 (+)

Expression


Co-expression Network