G360858


Basic Information

Item Value
gene id G360858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5011374 ~ 5015669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410007
ggggagatgtgctggtgtctaccattaggctggtctagtctggtctaggggagatgtgttggtgtctaccattaggctggtctagggaagatgtgttggtgtctaccaataggctggtctaggggagatgtgctggtgtctaccattaggctggtctaggctggtctaggggagatgtgctggtgtctaccaacaggctggtctaggggagatgtgttggtgtctaccattaggctggtctaagggagatgtgttggtgtctacCTTTaggctggtctagtctggtctaggggagatgtgctggtgtctaccaataggctggtctaggggagatgtgttggtgtctaccaataggctggtctagtctggtctaggggagatgtgctggtgtctaccaataggctggtctagtctggtctaggggagatgtgctggtgtctaccaataggctggtctaggggagatgtgctggtgtctaccattaggctggtctaggctggtctaggggagatgtgctgTTGTCTACCAAcaggctggtctaggggagatgtgttggtgtctaccattaggctggtctaggtGAGATGTGTTcgtgtctaccattaggctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410007 True 610 lncRNA 0.53 2 5011374 5015669

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 340789 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 412598 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1376259 3547948 ~ 3635115 (+)
musk musk coding upstream 1682108 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1862784 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 401799 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 561345 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 656980 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1472733 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1986783 7002452 ~ 7031982 (+)
G360851 NA non-coding upstream 8071 5002615 ~ 5003303 (+)
G360848 NA non-coding upstream 14096 4996456 ~ 4997278 (+)
G360842 NA non-coding upstream 29790 4981132 ~ 4981584 (+)
G360813 NA non-coding upstream 81129 4929350 ~ 4930245 (+)
G360784 NA non-coding upstream 134305 4872532 ~ 4877069 (+)
G360864 NA non-coding downstream 11816 5027485 ~ 5028257 (+)
G360869 NA non-coding downstream 16478 5032147 ~ 5032660 (+)
G360903 NA non-coding downstream 70744 5086413 ~ 5086772 (+)
G360926 NA non-coding downstream 130399 5146068 ~ 5148112 (+)
G360927 NA non-coding downstream 131711 5147380 ~ 5148247 (+)
G360276 sync other upstream 363374 4639016 ~ 4648000 (+)
G360287 NA other upstream 463518 4547035 ~ 4547856 (+)
G360261 NA other upstream 591305 4419741 ~ 4420069 (+)
G360234 NA other upstream 665857 4344082 ~ 4345517 (+)
G360121 NA other upstream 1000018 4008748 ~ 4011356 (+)
G360985 NA other downstream 281201 5296870 ~ 5299403 (+)
G361671 NA other downstream 788159 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2170257 7185926 ~ 7189819 (+)
G362554 NA other downstream 2674771 7690440 ~ 7692514 (+)
G362662 NA other downstream 2903253 7918922 ~ 7919565 (+)

Expression


Co-expression Network