G360864


Basic Information

Item Value
gene id G360864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5027485 ~ 5028257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410013
ggggggggttctcatcTTTTTACTTGATTCACTTTAATATCTATTACAGCAGCATTGACTTACTCAGGTTTCTCTCATTCAGCATCTAGTCAtGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAACAGAACATCAGGGGTTAACAGAACAGTCAGGGGTTAACAG
>TU410014
ggggggggttctcatcTTTTTACTTGATTCACTTTAATATCTATTACAGCAGCATTGACTTACTCAGGTTTCTCTCATTCAGCATCTAGTCAtGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAGAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAACAAACAGTCAGGGGTTAA

Function

NR:

description
PREDICTED: semaphorin-4C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410013 False 252 lncRNA 0.44 3 5027485 5028257
TU410014 True 419 lncRNA 0.45 2 5027485 5027996

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 356900 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 428709 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1392370 3547948 ~ 3635115 (+)
musk musk coding upstream 1698219 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 1878895 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 389211 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 548757 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 644392 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1460145 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1974195 7002452 ~ 7031982 (+)
G360858 NA non-coding upstream 11816 5011374 ~ 5015669 (+)
G360851 NA non-coding upstream 24182 5002615 ~ 5003303 (+)
G360848 NA non-coding upstream 30207 4996456 ~ 4997278 (+)
G360842 NA non-coding upstream 45901 4981132 ~ 4981584 (+)
G360813 NA non-coding upstream 97240 4929350 ~ 4930245 (+)
G360869 NA non-coding downstream 3890 5032147 ~ 5032660 (+)
G360903 NA non-coding downstream 58156 5086413 ~ 5086772 (+)
G360926 NA non-coding downstream 117811 5146068 ~ 5148112 (+)
G360927 NA non-coding downstream 119123 5147380 ~ 5148247 (+)
G360955 NA non-coding downstream 174414 5202671 ~ 5203613 (+)
G360276 sync other upstream 379485 4639016 ~ 4648000 (+)
G360287 NA other upstream 479629 4547035 ~ 4547856 (+)
G360261 NA other upstream 607416 4419741 ~ 4420069 (+)
G360234 NA other upstream 681968 4344082 ~ 4345517 (+)
G360121 NA other upstream 1016129 4008748 ~ 4011356 (+)
G360985 NA other downstream 268613 5296870 ~ 5299403 (+)
G361671 NA other downstream 775571 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 2157669 7185926 ~ 7189819 (+)
G362554 NA other downstream 2662183 7690440 ~ 7692514 (+)
G362662 NA other downstream 2890665 7918922 ~ 7919565 (+)

Expression


Co-expression Network