G360955


Basic Information

Item Value
gene id G360955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5202671 ~ 5203613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410124
atatatataataatacatataataatatatataatatattacatttgttttatttgataactttattatttaattccaagtcagCATCTCATCTCTATGGAGCTGTTGTCTGACAACATCACTATTTTAATAGTTCTTTAATGTCAATAAGACATACTACTCTGACTGCTGAATACTAACTAGCAGGCAATAAGACATACTGCTCTGACTGCTGAATACTAACTAGCAGGCACTtatatcatgtattttcaggtagagattcCTAGTGAAGcaactcctcttctcttcctctcatcaccctttctgtctcttttctccctctctggtctaCCGCACACAAAGACCGGTCGAAGTAggcgcgcaatggattatggtcattgcggttaattaccatgttttctGTGCTTGTCTATGTAGAGTATTGGCCTGTTGGGAACTACAACTGCCGACTGCATCGTACAGTTCTGGCTTGATCTTCAAACTGCGCATCGACgtcacagaaagaaagaaaacaacaaaaaaaaaaacgaaatggAATTCAAAGAATTGAACCAAATGTCCGGTTAATTAAATGTTTAATGACCGACATTTGGGTTTATCGCCCAGCACTAGAGTGTTATAAGTGTATTTGAGTCTTCTATAGGGGATTTTGGTGGGACTAGATTTTAACCATTTTACCAGTGTATACTGTTTCGTTCATTTTTGTCGGTCTAGATATAGATTATAATAGATTGCATTAATTAGAAAATAATTCTGGAATTTGCATTGATCCTTCATCTGCTACAAGTACGTCTTTATGTTCAGCAGGCCTCTGTGTTAATTGACACAAAGACACTGTGGAGCAGGGTCTCTTCAGCAGCTGTAATTGTGTTGGTGGTTCAGGACAATGTCCATGCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410124 True 900 lncRNA 0.37 2 5202671 5203613

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 532086 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 603895 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1567556 3547948 ~ 3635115 (+)
musk musk coding upstream 1873405 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 2054081 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 213855 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 373401 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 469036 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1284789 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1798839 7002452 ~ 7031982 (+)
G360927 NA non-coding upstream 54424 5147380 ~ 5148247 (+)
G360926 NA non-coding upstream 54559 5146068 ~ 5148112 (+)
G360903 NA non-coding upstream 115899 5086413 ~ 5086772 (+)
G360869 NA non-coding upstream 170011 5032147 ~ 5032660 (+)
G360864 NA non-coding upstream 174414 5027485 ~ 5028257 (+)
G360959 NA non-coding downstream 16820 5220433 ~ 5226103 (+)
G360960 NA non-coding downstream 23366 5226979 ~ 5227526 (+)
G360969 NA non-coding downstream 47079 5250692 ~ 5251226 (+)
G360973 NA non-coding downstream 59876 5263489 ~ 5263778 (+)
G360979 NA non-coding downstream 69494 5273107 ~ 5273785 (+)
G360276 sync other upstream 554671 4639016 ~ 4648000 (+)
G360287 NA other upstream 654815 4547035 ~ 4547856 (+)
G360261 NA other upstream 782602 4419741 ~ 4420069 (+)
G360234 NA other upstream 857154 4344082 ~ 4345517 (+)
G360121 NA other upstream 1191315 4008748 ~ 4011356 (+)
G360985 NA other downstream 93257 5296870 ~ 5299403 (+)
G361671 NA other downstream 600215 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1982313 7185926 ~ 7189819 (+)
G362554 NA other downstream 2486827 7690440 ~ 7692514 (+)
G362662 NA other downstream 2715309 7918922 ~ 7919565 (+)

Expression


Co-expression Network