G360979


Basic Information

Item Value
gene id G360979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5273107 ~ 5273785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410150
CTAGAGGTCAGGTTAACTAGAGGTTCACTAGAGGTCTGATTCACTAGAGGTCAAGTTCACTGGAGATTCACTAGAGGTCAGGTTCACTAAAGGTTCACTAGAGGTCAAGTTCACTAGAGGTCAAGTTCACTAGAGGTCAGGTTCACTAGAGATCAGGTTCACTAGAGGTCAGGTTCACTAGAGGTTCACTAGAGGTCAGGTTCACTAGAGGTTCACTAGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106566590

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410150 True 221 lncRNA 0.46 2 5273107 5273785

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 602522 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 674331 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1637992 3547948 ~ 3635115 (+)
musk musk coding upstream 1943841 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 2124517 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 143683 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 303229 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 398864 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1214617 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1728667 7002452 ~ 7031982 (+)
G360973 NA non-coding upstream 9329 5263489 ~ 5263778 (+)
G360969 NA non-coding upstream 21881 5250692 ~ 5251226 (+)
G360960 NA non-coding upstream 45581 5226979 ~ 5227526 (+)
G360959 NA non-coding upstream 47004 5220433 ~ 5226103 (+)
G360955 NA non-coding upstream 69494 5202671 ~ 5203613 (+)
G360980 NA non-coding downstream 5705 5279490 ~ 5344153 (+)
tcf4 tcf4 non-coding downstream 60258 4908459 ~ 5339341 (+)
G361000 NA non-coding downstream 70522 5344307 ~ 5344913 (+)
G361285 NA non-coding downstream 79874 5353659 ~ 5353986 (+)
G361302 NA non-coding downstream 113564 5387349 ~ 5387992 (+)
G360276 sync other upstream 625107 4639016 ~ 4648000 (+)
G360287 NA other upstream 725251 4547035 ~ 4547856 (+)
G360261 NA other upstream 853038 4419741 ~ 4420069 (+)
G360234 NA other upstream 927590 4344082 ~ 4345517 (+)
G360121 NA other upstream 1261751 4008748 ~ 4011356 (+)
G360985 NA other downstream 23085 5296870 ~ 5299403 (+)
G361671 NA other downstream 530043 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1912141 7185926 ~ 7189819 (+)
G362554 NA other downstream 2416655 7690440 ~ 7692514 (+)
G362662 NA other downstream 2645137 7918922 ~ 7919565 (+)

Expression


Co-expression Network