G360985


Basic Information

Item Value
gene id G360985
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5296870 ~ 5299403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410157
CTACAGGTCCCCTCTCTATGATGACTACAGGTcccctctctacgatgactacaggtccCCTCTCTATGATGACTACAGGTCTCCTCTCTACAATGACTACAGGTCCCCTCTCTATgatgactacaggtctcatcatcacacagctcctctctacgatgactacaggtcccctctctacgatgactacagGTctcctctctacgatgactacaggtctcctctctacgatgactacaggtctcatcagcacacagcccctctctacgatgactacaggtctcatcatcacacagcccctctctacgatgactacaggtctcatcATCACACAGCTCCTCTCTATGATGACTACAGGTCTCATcagcacacagcccctctctacgatgactacaggtctcatcatcacacagcccct

Function

NR:

description
PREDICTED: proteoglycan 4-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410157 True 415 TUCP 0.51 3 5296870 5299403

Neighbor

gene id symbol gene type direction distance location
LOC110523121 LOC106572199 coding upstream 626285 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 698094 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1661755 3547948 ~ 3635115 (+)
musk musk coding upstream 1967604 3258931 ~ 3329266 (+)
si:busm1-57f23.1 LOC106572555 coding upstream 2148280 3140042 ~ 3148590 (+)
LOC110524934 LOC106572350 coding downstream 118065 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 277611 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 373246 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1188999 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1703049 7002452 ~ 7031982 (+)
G360979 NA non-coding upstream 23085 5273107 ~ 5273785 (+)
G360973 NA non-coding upstream 33092 5263489 ~ 5263778 (+)
G360969 NA non-coding upstream 45644 5250692 ~ 5251226 (+)
G360960 NA non-coding upstream 69344 5226979 ~ 5227526 (+)
G360959 NA non-coding upstream 70767 5220433 ~ 5226103 (+)
tcf4 tcf4 non-coding downstream 34640 4908459 ~ 5339341 (+)
G361000 NA non-coding downstream 44904 5344307 ~ 5344913 (+)
G361285 NA non-coding downstream 54256 5353659 ~ 5353986 (+)
G361302 NA non-coding downstream 87946 5387349 ~ 5387992 (+)
G361316 NA non-coding downstream 119137 5418540 ~ 5418969 (+)
G360276 sync other upstream 648870 4639016 ~ 4648000 (+)
G360287 NA other upstream 749014 4547035 ~ 4547856 (+)
G360261 NA other upstream 876801 4419741 ~ 4420069 (+)
G360234 NA other upstream 951353 4344082 ~ 4345517 (+)
G360121 NA other upstream 1285514 4008748 ~ 4011356 (+)
G361671 NA other downstream 504425 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1886523 7185926 ~ 7189819 (+)
G362554 NA other downstream 2391037 7690440 ~ 7692514 (+)
G362662 NA other downstream 2619519 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3475929 8775134 ~ 8849107 (+)

Expression


Co-expression Network