G361000


Basic Information

Item Value
gene id G361000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5344307 ~ 5344913 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410172
gtatctttccTTTTACCTAACTGTGACAACCTggtactttttcaaccactgTAAATAGAGTGTAAATATGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACAGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACCAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACGAGTTCAGAGTAGACGGAGTGTAAATACCAGTTC

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF57.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410172 True 607 lncRNA 0.42 1 5344307 5344913

Neighbor

gene id symbol gene type direction distance location
tcf4 tcf4 coding upstream 4968 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 673722 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 745531 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1709192 3547948 ~ 3635115 (+)
musk musk coding upstream 2015041 3258931 ~ 3329266 (+)
LOC110524934 LOC106572350 coding downstream 72555 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 232101 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 327736 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1143489 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1657539 7002452 ~ 7031982 (+)
G360980 NA non-coding upstream 154 5279490 ~ 5344153 (+)
G360979 NA non-coding upstream 70522 5273107 ~ 5273785 (+)
G360973 NA non-coding upstream 80529 5263489 ~ 5263778 (+)
G360969 NA non-coding upstream 93081 5250692 ~ 5251226 (+)
G361285 NA non-coding downstream 8746 5353659 ~ 5353986 (+)
G361302 NA non-coding downstream 42436 5387349 ~ 5387992 (+)
G361316 NA non-coding downstream 73627 5418540 ~ 5418969 (+)
G361318 NA non-coding downstream 76501 5421414 ~ 5506324 (+)
G361339 NA non-coding downstream 126164 5471077 ~ 5474621 (+)
G360985 NA other upstream 44904 5296870 ~ 5299403 (+)
G360276 sync other upstream 696307 4639016 ~ 4648000 (+)
G360287 NA other upstream 796451 4547035 ~ 4547856 (+)
G360261 NA other upstream 924238 4419741 ~ 4420069 (+)
G360234 NA other upstream 998790 4344082 ~ 4345517 (+)
G361671 NA other downstream 458915 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1841013 7185926 ~ 7189819 (+)
G362554 NA other downstream 2345527 7690440 ~ 7692514 (+)
G362662 NA other downstream 2574009 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3430419 8775134 ~ 8849107 (+)

Expression


Co-expression Network