G361302


Basic Information

Item Value
gene id G361302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5387349 ~ 5387992 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410571
TAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGATCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACAACAGGCTGATCTCTGGATCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGCTCTATAGTACTGACTGACAACAGGCTGATCTCTGGC

Function

NR:

description
fibroin heavy chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410571 True 352 lncRNA 0.47 2 5387349 5387992

Neighbor

gene id symbol gene type direction distance location
tcf4 tcf4 coding upstream 48010 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 716764 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 788573 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1752234 3547948 ~ 3635115 (+)
musk musk coding upstream 2058083 3258931 ~ 3329266 (+)
LOC110524934 LOC106572350 coding downstream 29476 5417468 ~ 5458865 (+)
LOC110524936 NA coding downstream 189022 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 284657 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 1100410 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1614460 7002452 ~ 7031982 (+)
G361285 NA non-coding upstream 33363 5353659 ~ 5353986 (+)
G361000 NA non-coding upstream 42436 5344307 ~ 5344913 (+)
G360980 NA non-coding upstream 43196 5279490 ~ 5344153 (+)
G360979 NA non-coding upstream 113564 5273107 ~ 5273785 (+)
G361316 NA non-coding downstream 30548 5418540 ~ 5418969 (+)
G361318 NA non-coding downstream 33422 5421414 ~ 5506324 (+)
G361339 NA non-coding downstream 83085 5471077 ~ 5474621 (+)
G361365 NA non-coding downstream 141985 5529977 ~ 5531508 (+)
G361494 NA non-coding downstream 180827 5568819 ~ 5570615 (+)
G360985 NA other upstream 87946 5296870 ~ 5299403 (+)
G360276 sync other upstream 739349 4639016 ~ 4648000 (+)
G360287 NA other upstream 839493 4547035 ~ 4547856 (+)
G360261 NA other upstream 967280 4419741 ~ 4420069 (+)
G360234 NA other upstream 1041832 4344082 ~ 4345517 (+)
G361671 NA other downstream 415836 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1797934 7185926 ~ 7189819 (+)
G362554 NA other downstream 2302448 7690440 ~ 7692514 (+)
G362662 NA other downstream 2530930 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3387340 8775134 ~ 8849107 (+)

Expression


Co-expression Network