G361318


Basic Information

Item Value
gene id G361318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5421414 ~ 5506324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410595
gttaaataaaggcagttaacccactgtttcccaggtaggccgtcattgtaaagaagaatttgttcttaactgacttgcctagttaaataaaggcagttaacccactgtttcccaggtaggccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaaggcagttaacccactgtttcccaggtaggccgtcattgtaaataagaatttgttcttaactgacttgcctcgttaaattaaggcagttaacccactgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410595 True 271 lncRNA 0.39 3 5421414 5506324

Neighbor

gene id symbol gene type direction distance location
tcf4 tcf4 coding upstream 82075 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 750829 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 822638 4561350 ~ 4598776 (+)
grin3a LOC106572512 coding upstream 1786299 3547948 ~ 3635115 (+)
musk musk coding upstream 2092148 3258931 ~ 3329266 (+)
LOC110524936 NA coding downstream 70690 5577014 ~ 5577940 (+)
LOC110522836 LOC105008486 coding downstream 166325 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 982078 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1496128 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 2224660 7730984 ~ 7741925 (+)
G361316 NA non-coding upstream 2445 5418540 ~ 5418969 (+)
G361302 NA non-coding upstream 33422 5387349 ~ 5387992 (+)
G361285 NA non-coding upstream 67428 5353659 ~ 5353986 (+)
G361000 NA non-coding upstream 76501 5344307 ~ 5344913 (+)
G360980 NA non-coding upstream 77261 5279490 ~ 5344153 (+)
G361365 NA non-coding downstream 23653 5529977 ~ 5531508 (+)
G361494 NA non-coding downstream 62495 5568819 ~ 5570615 (+)
G361496 NA non-coding downstream 66608 5572932 ~ 5573148 (+)
G361498 NA non-coding downstream 69655 5575979 ~ 5576363 (+)
G361509 NA non-coding downstream 134637 5640961 ~ 5661068 (+)
G360985 NA other upstream 122011 5296870 ~ 5299403 (+)
G360276 sync other upstream 773414 4639016 ~ 4648000 (+)
G360287 NA other upstream 873558 4547035 ~ 4547856 (+)
G360261 NA other upstream 1001345 4419741 ~ 4420069 (+)
G360234 NA other upstream 1075897 4344082 ~ 4345517 (+)
G361671 NA other downstream 297504 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1679602 7185926 ~ 7189819 (+)
G362554 NA other downstream 2184116 7690440 ~ 7692514 (+)
G362662 NA other downstream 2412598 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3269008 8775134 ~ 8849107 (+)

Expression


Co-expression Network