G361542


Basic Information

Item Value
gene id G361542
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5672133 ~ 5672494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410878
CGAACTACGTCTTTAGGGCCTTGATGAGGAAAGCCAATGATAATACACGCTGGAACATTCGAATTAAATACTGTTTTATTACATTGTTCGTATTTTAGGAAAGACTGGTATTTTCTATGTAATTGTTACATCACAGCCATGGCTATAAGGGCTCCAGCTTTTGTAAAGTTAACGTCAAAAAATGAGATTTTGTTTAGCCTTTTTCAGCCTActgcgtaaattctcctaacCTCTCACGCAAATTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410878 True 248 lncRNA 0.37 2 5672133 5672494

Neighbor

gene id symbol gene type direction distance location
LOC110524936 NA coding upstream 94193 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 213268 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 332794 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 1001548 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 1073357 4561350 ~ 4598776 (+)
LOC110522836 LOC105008486 coding downstream 155 5672649 ~ 5760948 (+)
LOC110523126 LOC106572095 coding downstream 815908 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1329958 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 2058490 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 2069753 7742247 ~ 7868565 (+)
G361509 NA non-coding upstream 11065 5640961 ~ 5661068 (+)
G361517 NA non-coding upstream 16275 5652052 ~ 5655858 (+)
G361516 NA non-coding upstream 18349 5647882 ~ 5653784 (+)
G361498 NA non-coding upstream 95770 5575979 ~ 5576363 (+)
G361496 NA non-coding upstream 98985 5572932 ~ 5573148 (+)
G361544 NA non-coding downstream 3470 5675964 ~ 5676904 (+)
G361546 NA non-coding downstream 10237 5682731 ~ 5683909 (+)
G361547 NA non-coding downstream 11474 5683968 ~ 5684598 (+)
G361551 NA non-coding downstream 18312 5690806 ~ 5691097 (+)
G361552 NA non-coding downstream 20718 5693212 ~ 5694071 (+)
G360985 NA other upstream 372730 5296870 ~ 5299403 (+)
G360276 sync other upstream 1024133 4639016 ~ 4648000 (+)
G360287 NA other upstream 1124277 4547035 ~ 4547856 (+)
G360261 NA other upstream 1252064 4419741 ~ 4420069 (+)
G360234 NA other upstream 1326616 4344082 ~ 4345517 (+)
G361671 NA other downstream 131334 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1513432 7185926 ~ 7189819 (+)
G362554 NA other downstream 2017946 7690440 ~ 7692514 (+)
G362662 NA other downstream 2246428 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3102838 8775134 ~ 8849107 (+)

Expression


Co-expression Network