G361544


Basic Information

Item Value
gene id G361544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5675964 ~ 5676904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU410882
cttgttgatagtgttgttaagaagGTAGagactagggcctgtaggacctgccttgttgatagtgctgttaagaaagtagaaactagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttgatagtgctgttaagaaggtagaaactagggcctgtaggacctgccttgttgactgACAGTGCTGTTGTTAAGAAGGTGGAGCAGCGCCTTatggacatacttctccccatcttagctactgttgtatcaatatgttttgaccatgacagtttacaatccagggttactccaagcagtttagttcatctcaacttgctcaatttccacattatttattacaatatttagtttcGGTTcaaggtttagtgaatgatttgttccaaatacaatgcttttagtttttaaattatttagcactaatttattccttgccacccattctgaaactaactgcagctctttgttaagtgttgcagtcatttcagtcgctgtagtagctgacgtgtaatagtgttgagtcatccgcatacatagacacactttaTTCAAAGCCAGTGGcttgtcattagtaaagattgaaaacaGTAAGCGGCATTGGGAGCTGccttggggaattcctgattcttcCTGGATTATGTTAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU410882 True 683 lncRNA 0.41 3 5675964 5676904

Neighbor

gene id symbol gene type direction distance location
LOC110524936 NA coding upstream 98024 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 217099 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 336625 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 1005379 4654146 ~ 4670585 (+)
LOC110523122 onecut2 coding upstream 1077188 4561350 ~ 4598776 (+)
LOC110523126 LOC106572095 coding downstream 811498 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1325548 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 2054080 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 2065343 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 2573255 8250159 ~ 8289257 (+)
G361542 NA non-coding upstream 3470 5672133 ~ 5672494 (+)
G361509 NA non-coding upstream 14896 5640961 ~ 5661068 (+)
G361517 NA non-coding upstream 20106 5652052 ~ 5655858 (+)
G361516 NA non-coding upstream 22180 5647882 ~ 5653784 (+)
G361498 NA non-coding upstream 99601 5575979 ~ 5576363 (+)
G361546 NA non-coding downstream 5827 5682731 ~ 5683909 (+)
G361547 NA non-coding downstream 7064 5683968 ~ 5684598 (+)
G361551 NA non-coding downstream 13902 5690806 ~ 5691097 (+)
G361552 NA non-coding downstream 16308 5693212 ~ 5694071 (+)
G361555 NA non-coding downstream 22666 5699570 ~ 5699925 (+)
G360985 NA other upstream 376561 5296870 ~ 5299403 (+)
G360276 sync other upstream 1027964 4639016 ~ 4648000 (+)
G360287 NA other upstream 1128108 4547035 ~ 4547856 (+)
G360261 NA other upstream 1255895 4419741 ~ 4420069 (+)
G360234 NA other upstream 1330447 4344082 ~ 4345517 (+)
G361671 NA other downstream 126924 5803828 ~ 5927926 (+)
G362297 zbtb43 other downstream 1509022 7185926 ~ 7189819 (+)
G362554 NA other downstream 2013536 7690440 ~ 7692514 (+)
G362662 NA other downstream 2242018 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 3098428 8775134 ~ 8849107 (+)

Expression


Co-expression Network