G361720


Basic Information

Item Value
gene id G361720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5912822 ~ 5931093 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411125
attctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatacccattctaacaatatccattctaacagtatccattctaacagtatccattctaaaagtatccattcccacagtatccattctaactacccattctaacagtatccattctaacaatatccattctaacaatatccagtatccattctaacggtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatatccattctaactgtatccattctaacagtacccattctaacagtatccattctaacagtacccattctaacagtatccattctaactacccattccaacactacccattctaacagtacccattctaactacccattataacagtatccattctatcagtatccattctaacagtatccattctaacagtagccagtatccattctaacaatatccattctaacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatacccattctaacaatatccattctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccagtatccaccctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaactacccattctaacagtatccattctatcagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaactacccattataacagtatccattctatcagtatccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtacccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatccattctaactacccattctaacagtatccattctaacagtatccattctaacagtatccagtatccattctaacagtatccatttgaACAGTAtctattctaaaagtatccattctaacagtatccattctaacaatatccagtatccattctaactgtatccattctaacggtatccattctaacagtatccattctaacagtacccactctaacagtatccattccaacagtacccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtatccagtatccaccctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccagtatccaccctaacactatccattctaacagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaactacccattctaacagtatccattctatcagtatccattctaacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaactgtatccattctaacagtacccattctaacagtatccattctaacagtacccattctaacagtatccattctaactacccattccaacactacccattctaacagtacccattctaacagtacccattctaatagtatccattctaacagtacccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatacattctaacagtacccattctaacagtatccattctaaaagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaagtACCCATTCTAGCAGTATCCATTCtatcagtatccattctaacagtatccattctaacagtagccagtatccattctaacaatatccattctaacagtatccattctaacagtatccattctaactacccattctaacagtatccattctaacagtatccattctaacagtatccagtatccatcctaacagcatccattcgaacagtatctattctaaaagtatccattctaacaatatccattctaacaatatccagtatccattctaacggtatccattctaacggtatccattctaacagtatccattgtAACTACCCATTCCaacactacccattctaacagtacccattctaacagtacccattctaatagtatccattctaacagtacccattccaacagtatccattctaacagtatccattctaaaagtatccattctaacattatccattctaacagtatacattctaacagtacccattctaacagtatccattctaaaagtatccattctaacagtatccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtacccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatccattctaactacccattctaacagtatccattctaacagtatccattctaacagtatccagtatccattctaacagtatccatttgaACAGTAtctattctaaaagtatccattctaacagtatccattctaacaatatccagtatccattctaactgtatccattctaacggtatccattctaacagtatccattctaacagtacccactctaacagtatccattccaacagtacccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtatccattctaacagtatccagtatccattctaacagtatccatttgaACAGTAtctattctaaaagtatccattctaacagtatccattctaacaatatccagtatccaccctaacaatatccagtctaacagtacccattctaacagtacccattctaacagtacccattctaacaatatccattctaactgtatccattctaacagtacccattctaacagtatccattctaacagtacccattctaacagtatccattctaactacccattccaacactacccattctaacagtacccattctaactacccattataacagtatccattctatcagtatccattctaacagtatccattctaacagtagccagtatccattctaacaatatccattctaacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatacccattctaacaatatccattctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccagtatccaccctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaactacccattctaacagtatccattctatcagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaactacccattataacagtatccattctatcagtatccattctaacagtatccattctaacagtagccagtatccattctaacaatatccattctaacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatacccattctaacaatatccattctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccagtatccaccctaacaatatccattctaacagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaactacccattctaacagtatccattctatcagtatccattctaacagtatccattctaacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaacagtacccattctaacaatatccattctaactgtatccattctaacagtacccattctaacagtatccattctaacagtacccattctaacagtatccattctaactacccattccaacactacccattctaacagtacccattctaacagtacccattctaatagtatccattctaacagtacccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatacattctaacagtacccattctaacagtatccattctaaaagtatccattctaacagtatccattctaacagtatccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatccattctaacagtatccattctaaaagtatccattctaacagtatccattctaacagtatccattctaacagtatcaattctaactacccattctaacagtatccattctaacagcatccattctaacagtatccagtatccattctaacagtatccatttgaACAGTAtctattctaaaagtatccattctaacagtacccattcttacagtatccattctaacagtatccattctaacagtacccattctaacagtacccattctaactacccattataacagtatccattctatcagtatccattctaacagtatccattctaac

Function

NR:

description
PREDICTED: salivary glue protein Sgs-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411125 True 4886 lncRNA 0.35 2 5912822 5931093

Neighbor

gene id symbol gene type direction distance location
LOC110524935 rab27b coding downstream 348457 5471029 ~ 5564365 (-)
nars1 sync coding downstream 1264870 4639020 ~ 4647952 (-)
fech fech coding downstream 1274691 4615001 ~ 4638131 (-)
LOC110513199 dcc coding downstream 1495291 3782114 ~ 4417531 (-)
LOC118964541 NA coding downstream 2243144 3662499 ~ 3669678 (-)
LOC110523123 LOC106572171 coding upstream 14071 5945164 ~ 5954687 (-)
LOC110523124 wdr7 coding upstream 162876 6093969 ~ 6436847 (-)
LOC110524940 LOC106572087 coding upstream 506173 6437266 ~ 6484290 (-)
LOC110523127 LOC106572117 coding upstream 574288 6505381 ~ 6510017 (-)
LOC110524941 LOC106572051 coding upstream 632530 6562531 ~ 6726634 (-)
G361717 NA non-coding downstream 2392 5803875 ~ 5910430 (-)
G361723 NA non-coding downstream 38293 5870832 ~ 5874529 (-)
G361732 NA non-coding downstream 60095 5845322 ~ 5852727 (-)
G361669 NA non-coding downstream 109095 5803171 ~ 5803727 (-)
G361664 NA non-coding downstream 112439 5800167 ~ 5800383 (-)
G361750 NA non-coding upstream 30658 5961751 ~ 5961952 (-)
G361755 NA non-coding upstream 47385 5978478 ~ 5979071 (-)
G361763 NA non-coding upstream 54269 5985362 ~ 5985703 (-)
G363287 NA non-coding upstream 89289 6020382 ~ 6043082 (-)
G363294 NA non-coding upstream 159728 6090821 ~ 6092820 (-)
G361170 NA other downstream 830954 5080578 ~ 5081868 (-)
G360703 NA other downstream 1173120 4738312 ~ 4739702 (-)
G360610 NA other downstream 1361895 4550346 ~ 4550927 (-)
G360532 NA other downstream 1612797 4299392 ~ 4300025 (-)
G363470 LOC106572095 other upstream 612582 6543675 ~ 6554715 (-)
G364322 NA other upstream 2372174 8303267 ~ 8304183 (-)
G364754 NA other upstream 3116449 9047542 ~ 9099000 (-)

Expression


Co-expression Network