G361707


Basic Information

Item Value
gene id G361707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5955991 ~ 5956201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411074
ggctatctctctgtctgtccatactCGGCTGCTCCTGTCACATGGACTCTGTGCTCAATGGGCCAGAAGAAGAGGCTCCATGAATCGTCCATTAGCCCAGTTGGGTTTATAACCTGGCCAAATGGCTTCAAACTGCTTTCCAGCCAAATTGGCAACAACATACATCACCATTTGTTCAGTTTTTTTCAGCCCTCTGTAgtcagtgtcccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411074 True 211 lncRNA 0.48 1 5955991 5956201

Neighbor

gene id symbol gene type direction distance location
LOC110522836 LOC105008486 coding upstream 195043 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 378051 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 497126 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 616652 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 1285406 4654146 ~ 4670585 (+)
LOC110523126 LOC106572095 coding downstream 532201 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1046251 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 1774783 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 1786046 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 2293958 8250159 ~ 8289257 (+)
G361671 NA non-coding upstream 28065 5803828 ~ 5927926 (+)
G361677 NA non-coding upstream 58586 5864872 ~ 5897405 (+)
G361683 NA non-coding upstream 97232 5855193 ~ 5858759 (+)
G361681 NA non-coding upstream 103500 5845276 ~ 5852491 (+)
G361680 NA non-coding upstream 106937 5841624 ~ 5849054 (+)
G361709 NA non-coding downstream 940 5957141 ~ 5957366 (+)
G361712 NA non-coding downstream 4573 5960774 ~ 5961024 (+)
G361713 NA non-coding downstream 5273 5961474 ~ 5961812 (+)
G361715 NA non-coding downstream 17658 5973859 ~ 5974283 (+)
G361762 NA non-coding downstream 29268 5985469 ~ 5985694 (+)
G360985 NA other upstream 656588 5296870 ~ 5299403 (+)
G360276 sync other upstream 1307991 4639016 ~ 4648000 (+)
G360287 NA other upstream 1408135 4547035 ~ 4547856 (+)
G360261 NA other upstream 1535922 4419741 ~ 4420069 (+)
G362297 zbtb43 other downstream 1229725 7185926 ~ 7189819 (+)
G362554 NA other downstream 1734239 7690440 ~ 7692514 (+)
G362662 NA other downstream 1962721 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 2819131 8775134 ~ 8849107 (+)
G364850 NA other downstream 3272637 9228838 ~ 9229231 (+)

Expression


Co-expression Network