G361762


Basic Information

Item Value
gene id G361762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 5985469 ~ 5985694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411175
AATTGAGAACAGTATTGGCAGTGTTGAACTCAATTTTCATCATAGCAAACTAGGACTGATAGTTTGGTTCGCTAAACTAAGCAAGTCTGTCTGTTTTGGTTACCAtagcaactactgtagctatccgGTCAACTTGCTAGCTTCTTCAGTGGACGTTGAACACAATTTCTACCCGCAAATGTGTTCAATTACAGCCAATGGTATCGAAGGGATAAATcaactcggg

Function

NR:

description
beta-crystallin S-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411175 True 226 lncRNA 0.41 1 5985469 5985694

Neighbor

gene id symbol gene type direction distance location
LOC110522836 LOC105008486 coding upstream 224521 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 407529 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 526604 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 646130 4908459 ~ 5339341 (+)
LOC110523121 LOC106572199 coding upstream 1314884 4654146 ~ 4670585 (+)
LOC110523126 LOC106572095 coding downstream 502708 6488402 ~ 6555494 (+)
LOC118964554 angptl2 coding downstream 1016758 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 1745290 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 1756553 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 2264465 8250159 ~ 8289257 (+)
G361715 NA non-coding upstream 11186 5973859 ~ 5974283 (+)
G361713 NA non-coding upstream 23657 5961474 ~ 5961812 (+)
G361712 NA non-coding upstream 24445 5960774 ~ 5961024 (+)
G361709 NA non-coding upstream 28103 5957141 ~ 5957366 (+)
G361707 NA non-coding upstream 29268 5955991 ~ 5956201 (+)
G361766 NA non-coding downstream 3867 5989561 ~ 5989963 (+)
G361767 NA non-coding downstream 5158 5990852 ~ 5991523 (+)
G361769 NA non-coding downstream 7331 5993025 ~ 5993239 (+)
G361771 NA non-coding downstream 7981 5993675 ~ 5993991 (+)
G361776 NA non-coding downstream 11804 5997498 ~ 5998121 (+)
G361671 NA other upstream 57543 5803828 ~ 5927926 (+)
G360985 NA other upstream 686066 5296870 ~ 5299403 (+)
G360276 sync other upstream 1337469 4639016 ~ 4648000 (+)
G360287 NA other upstream 1437613 4547035 ~ 4547856 (+)
G360261 NA other upstream 1565400 4419741 ~ 4420069 (+)
G362297 zbtb43 other downstream 1200232 7185926 ~ 7189819 (+)
G362554 NA other downstream 1704746 7690440 ~ 7692514 (+)
G362662 NA other downstream 1933228 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 2789638 8775134 ~ 8849107 (+)
G364850 NA other downstream 3243144 9228838 ~ 9229231 (+)

Expression


Co-expression Network