G363317


Basic Information

Item Value
gene id G363317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 6106992 ~ 6111412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU413020
gttgattatgtatcaggtaaaggtgttgtaggacacaaCAGGTGTGACTACAGGGTTATAGTTGATTCTGTATCAGataaaggtgttgtaggacacagcaggtgtcCTCTACAGTGATCTGCAGGACATGTGTGTTCTACTGACCAGCAGACTGACCCAGGggcctgacagaggagagagcagcGTTATCCTGTCAAGCTGTTGCAGTGCACCCTGGGTACTCGGCTGATGGTCATTGAAATCAAATAGTCGTTTTCTACCCTCCCAAATCTAAACCAACACAGTTCAGAAAACACCTGCTACCCAGTCAGATTTTAGAAAATGGGGAAATGGCGTTTGACTCGAGAGAAAATCAATATGCTGGGAGACGCAGTAAACAGCAGCTAAATAATTCAATAGAAAATATGTGTACAGTTGGATAAGAGcagaaaacactacacacacacacacacacacacacacacacacacacacacacacacacaggtggataTTATACATTTACCAAAACATCTGTTTTTAGGAGCAGCAGATCAATAAGGGAGACCGGTCTACTTCCAGACTTCAGAAGTCAACAGACTTTGTAGGTAATAGAAAATACCGGTCTCACACCCAGCATttagagagattatagtaacagtatttagagagagattatagtaacagtatttagagagagattatagtaacagtgtttagagattatagtaacagtatttagagagagattatagtaacagtatttagagattatagtaacagtatttagagagagattatagtaacagtagttagatagagattatagtaacagtatttagagattatagtaacagtatttagagattatagtaacagtatttagagagag

Function

NR:

description
uncharacterized protein LOC110516839, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU413020 True 871 lncRNA 0.39 2 6106992 6111412

Neighbor

gene id symbol gene type direction distance location
LOC110523123 LOC106572171 coding downstream 152305 5945164 ~ 5954687 (-)
LOC110524935 rab27b coding downstream 542627 5471029 ~ 5564365 (-)
nars1 sync coding downstream 1459040 4639020 ~ 4647952 (-)
fech fech coding downstream 1468861 4615001 ~ 4638131 (-)
LOC110513199 dcc coding downstream 1689461 3782114 ~ 4417531 (-)
LOC110524940 LOC106572087 coding upstream 325854 6437266 ~ 6484290 (-)
LOC110523127 LOC106572117 coding upstream 393969 6505381 ~ 6510017 (-)
LOC110524941 LOC106572051 coding upstream 452211 6562531 ~ 6726634 (-)
LOC110523129 NA coding upstream 644341 6755753 ~ 6763633 (-)
LOC110524942 LOC106572043 coding upstream 663993 6775405 ~ 6860173 (-)
G363294 NA non-coding downstream 14172 6090821 ~ 6092820 (-)
G363287 NA non-coding downstream 63910 6020382 ~ 6043082 (-)
G361763 NA non-coding downstream 121289 5985362 ~ 5985703 (-)
G361755 NA non-coding downstream 127921 5978478 ~ 5979071 (-)
G361750 NA non-coding downstream 145040 5961751 ~ 5961952 (-)
G363322 NA non-coding upstream 14213 6125625 ~ 6126067 (-)
G363346 NA non-coding upstream 70952 6182364 ~ 6182861 (-)
G363357 NA non-coding upstream 84027 6195439 ~ 6196151 (-)
G363360 NA non-coding upstream 90317 6201729 ~ 6202000 (-)
G363367 NA non-coding upstream 102712 6214124 ~ 6214629 (-)
G361170 NA other downstream 1025124 5080578 ~ 5081868 (-)
G360703 NA other downstream 1367290 4738312 ~ 4739702 (-)
G360610 NA other downstream 1556065 4550346 ~ 4550927 (-)
G360532 NA other downstream 1806967 4299392 ~ 4300025 (-)
G363470 LOC106572095 other upstream 432263 6543675 ~ 6554715 (-)
G364322 NA other upstream 2191855 8303267 ~ 8304183 (-)
G364754 NA other upstream 2936130 9047542 ~ 9099000 (-)
G365752 NA other upstream 3078257 9189669 ~ 9190098 (-)

Expression


Co-expression Network