G363470 (LOC106572095)


Basic Information

Item Value
gene id G363470
gene name LOC106572095
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 6543675 ~ 6554715 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU413187
TTTTTTTGGTGACTTTTTTTGGGGGCTCAATCGAGGCCTGGGGTTGGTGGATAAATGCCATGTGACAGATTGAATACTGAGACTTATTTTCCTTGCAGCtcaggtagagaggaagagaaggccTTGGTTTCATCCTCTTCTTCTCTATGAGACACTGACGGGTTggagaggggggcagggggagGTGTGGCCCTCCCTCCTGACCAATAGGACAGGACTCTCCTCTAGAGGCTCCTCCCCCGTTACCGCCGTCCCTTCCGGAGCGCCCCCGTTCTCTTCGTTGTAGAGTCGTTTGATCCCCTCGTAGAATTCGTcgacctccaGTGGCTGGGTTTGGGTGGTCCATGGACCTGGAGCAGGGTGGTAGAGGAGACCCAGGAGAGGCTCCTGTCCCTAGGGGCCGTGGATGGGGCCGGTGGGTCTGTGTCTGGGAGCCTGGTGTCGGACTCTCTTCCCCAGGTGCAGGGGTCCGGGTCCAGACTGTGGTGCAGGGACTGGTAGATGTACACAGTGTTGGGAGGCAGGGAAGCTTCCTGTGTGGACAGGTGACGTGACACCAGCTCTCGACATCGGATCAGCTGAGAACTGTCAATTGTGTTTTCCTGAGCAGGTTGATCGTGAGAGCCAGCCAGTCAGGGCAGATATTCTCCAGCTCCAGGGTGATGAGGGCCAGCGCCAGCATGGATCCCCGGGAGAGGGGCTGTAGCAGGGCGCTGTCGGCCAGGCAGTAGTGCAGCTGCTGGGTCAACACGGACAGGTGCTGCGCCGGGTTACACCCCACCAGACCCACCATGAACCGTGGCTTGCAGGACAGCACCATGACAT
>TU413188
TGTTGAAGCAGCCAAGCTCTCACCTTGCGCTTGGCTGAGTGCTTGCAGCGCAGGGAGACTTGGTGGGAGTGGTGGCTGGGTTTGGGTGGTCCATGGACCTGGAGCAGGGTGGTAGAGGAGACCCAGGAGAGGCTCCTGTCCCTAGGGGCCGTGGATGGGGCCGGTGGGTCTGTGTCTGGGAGCCTGGTGTCGGACTCTCTTCCCCAGGTGCAGGGGTCCGGGTCCAGACTGTGGTGCAGGGACTGGTAGATGTACACAGTGTTGGGAGGCAGGGAAGCTTCCTGTGTGGACAGGTGACGTGACACCAGCTCTCGACATCGGATCAGCTGAGAACTGTCAACTGTGTTTTCCTGAGCAGGTTGATCGTGAGAGCCAGCCAGTCAGGGCAGATATTCTCCAGCTCCAGGGTGATGAGGGCCAGCGCCAGCATGGATCCCCGGGAGAGGGGCTGTAGCAGGGCGCTGTCGGCCAGGCAGTAGTGCAGCTGCTGGGTCAACACGGACAGGTGCTGCGCCGGGTTACACCCCACCAGACCCACCATGAACCGTGGCTTGCAGGACAGCACCATGACAT

Function

NR:

description
cyclin-I-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU413187 False 825 TUCP 0.59 3 6543675 6554715
TU413188 True 573 TUCP 0.62 2 6543675 6551674

Neighbor

gene id symbol gene type direction distance location
LOC110523127 LOC106572117 coding downstream 33658 6505381 ~ 6510017 (-)
LOC110524940 LOC106572087 coding downstream 59385 6437266 ~ 6484290 (-)
LOC110523124 wdr7 coding downstream 106828 6093969 ~ 6436847 (-)
LOC110523123 LOC106572171 coding downstream 588988 5945164 ~ 5954687 (-)
LOC110524935 rab27b coding downstream 979310 5471029 ~ 5564365 (-)
LOC110524941 LOC106572051 coding upstream 8908 6562531 ~ 6726634 (-)
LOC110523129 NA coding upstream 201038 6755753 ~ 6763633 (-)
LOC110524942 LOC106572043 coding upstream 220690 6775405 ~ 6860173 (-)
LOC110523130 ralgps1 coding upstream 313163 6867878 ~ 7163472 (-)
LOC118964555 NA coding upstream 320601 6875316 ~ 6875924 (-)
G363491 NA non-coding downstream 48450 6493086 ~ 6495225 (-)
G363417 NA non-coding downstream 223887 6318686 ~ 6319788 (-)
G363404 NA non-coding downstream 256063 6286744 ~ 6287612 (-)
G363394 NA non-coding downstream 275146 6268004 ~ 6268529 (-)
G363382 NA non-coding downstream 300272 6242902 ~ 6243403 (-)
G363515 NA non-coding upstream 18693 6573408 ~ 6575248 (-)
G363550 NA non-coding upstream 120127 6674842 ~ 6675971 (-)
G363559 NA non-coding upstream 138409 6693124 ~ 6694454 (-)
G363565 NA non-coding upstream 161174 6715889 ~ 6716306 (-)
G361170 NA other downstream 1461807 5080578 ~ 5081868 (-)
G360703 NA other downstream 1803973 4738312 ~ 4739702 (-)
G360610 NA other downstream 1992748 4550346 ~ 4550927 (-)
G360532 NA other downstream 2243650 4299392 ~ 4300025 (-)
G364322 NA other upstream 1748552 8303267 ~ 8304183 (-)
G364754 NA other upstream 2492827 9047542 ~ 9099000 (-)
G365752 NA other upstream 2634954 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 5579337 12134052 ~ 12136790 (-)

Expression


Co-expression Network