G362092


Basic Information

Item Value
gene id G362092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 6740405 ~ 6740634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411555
CCATTTTCTAGGTCTTTGCTTCCACTCTGGATAGCTTACAAGGGTTAGGATATCATTCCTACTGTGTGCCAAAGCACGTAATTCCGTGTGCTAGAGAACATAATTCCTCCTTATTAGTTTACACACGTTTGCTGAATATTTGGCCAATTTTCCCAAAACAAACACAGAACTCTACAAATCTCTAGCAAGAGTAAACAATTCATTCAaaactgttttacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411555 True 230 lncRNA 0.38 1 6740405 6740634

Neighbor

gene id symbol gene type direction distance location
LOC110523126 LOC106572095 coding upstream 184911 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 979457 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 1162465 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 1281540 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 1401066 4908459 ~ 5339341 (+)
LOC118964554 angptl2 coding downstream 261818 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 990350 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 1001613 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 1509525 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 1550221 8290855 ~ 8307147 (+)
G362079 NA non-coding upstream 21685 6718410 ~ 6718720 (+)
G362053 NA non-coding upstream 45724 6693119 ~ 6694681 (+)
G362045 NA non-coding upstream 105608 6634193 ~ 6634797 (+)
G362019 NA non-coding upstream 158423 6581705 ~ 6581982 (+)
G362011 NA non-coding upstream 176516 6562537 ~ 6563889 (+)
G362095 NA non-coding downstream 3294 6743928 ~ 6744216 (+)
G362096 NA non-coding downstream 3711 6744345 ~ 6744630 (+)
G362098 NA non-coding downstream 11727 6752361 ~ 6801297 (+)
G362106 LOC106572043 non-coding downstream 37127 6777761 ~ 6782258 (+)
G362118 LOC106572043 non-coding downstream 55595 6796229 ~ 6799116 (+)
G361671 NA other upstream 812479 5803828 ~ 5927926 (+)
G360985 NA other upstream 1441002 5296870 ~ 5299403 (+)
G360276 sync other upstream 2092405 4639016 ~ 4648000 (+)
G360287 NA other upstream 2192549 4547035 ~ 4547856 (+)
G360261 NA other upstream 2320336 4419741 ~ 4420069 (+)
G362297 zbtb43 other downstream 445292 7185926 ~ 7189819 (+)
G362554 NA other downstream 949806 7690440 ~ 7692514 (+)
G362662 NA other downstream 1178288 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 2034698 8775134 ~ 8849107 (+)
G364850 NA other downstream 2488204 9228838 ~ 9229231 (+)

Expression


Co-expression Network