G362158


Basic Information

Item Value
gene id G362158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 6841960 ~ 6843434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411648
attttataccatctgcTGGACCTTGCCtgtgccgctcggccatcgctcatccatatatttatatggacATATTTTAATTCAcctctttagatttgtgtgtattaggtggtTGTtgggggaattgttagatattacttgttagatattactgcatggttggaactagaagcacaagaatttcgctacactctcattaacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatttgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatggaccaataacatctgctaaccatgtgtatgggccaataacatttgatttgtatcATCTtggttcagcttatcaaccagctaattattagaatcaggtgtgttaaaacCTCCAGGATGGTAGGAGATGGTTGGAGAGCCTTGGTCTAAACGTATGCAGGTATGTAGGATTTGGGGAAGGGGATTTAAATAACCATGAGCATTGAATGACATCCGGTTTTTAGCAGAACATTTTGGAATGGATACCTTTTTGGAGGTGGACAAGGATACTTTGTATCCATAGTTCCAGAGTCATCACTTCCCGTGTCTCCTTTCCTATGGTCAGACTGCTCGACCTCCATGGCATCATCCTGCAGGCCAACACTGGAGgggatgctgtctgtctgttaaacaAGTAACACAAGACACCTG

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RNF213-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411648 True 992 lncRNA 0.41 2 6841960 6843434

Neighbor

gene id symbol gene type direction distance location
LOC110523126 LOC106572095 coding upstream 286466 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 1081012 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 1264020 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 1383095 5417468 ~ 5458865 (+)
tcf4 tcf4 coding upstream 1502621 4908459 ~ 5339341 (+)
LOC118964554 angptl2 coding downstream 159018 7002452 ~ 7031982 (+)
LOC118964556 NA coding downstream 887550 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 898813 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 1406725 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 1447421 8290855 ~ 8307147 (+)
G362156 NA non-coding upstream 238 6841346 ~ 6841722 (+)
G362149 NA non-coding upstream 5658 6835478 ~ 6836302 (+)
G362111 NA non-coding upstream 11687 6827882 ~ 6830273 (+)
G362098 NA non-coding upstream 40663 6752361 ~ 6801297 (+)
G362122 NA non-coding downstream 24074 6867508 ~ 6868310 (+)
G362234 NA non-coding downstream 179173 7022607 ~ 7022965 (+)
G362249 NA non-coding downstream 215398 7058832 ~ 7059295 (+)
G362255 NA non-coding downstream 223609 7067043 ~ 7067771 (+)
G362293 NA non-coding downstream 299369 7142803 ~ 7143996 (+)
G361671 NA other upstream 914034 5803828 ~ 5927926 (+)
G360985 NA other upstream 1542557 5296870 ~ 5299403 (+)
G360276 sync other upstream 2193960 4639016 ~ 4648000 (+)
G360287 NA other upstream 2294104 4547035 ~ 4547856 (+)
G360261 NA other upstream 2421891 4419741 ~ 4420069 (+)
G362297 zbtb43 other downstream 342492 7185926 ~ 7189819 (+)
G362554 NA other downstream 847006 7690440 ~ 7692514 (+)
G362662 NA other downstream 1075488 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 1931898 8775134 ~ 8849107 (+)
G364850 NA other downstream 2385404 9228838 ~ 9229231 (+)

Expression


Co-expression Network