G362297 (zbtb43)


Basic Information

Item Value
gene id G362297
gene name zbtb43
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 7185926 ~ 7189819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU411797
TGGCATCCATAGCTCCGTCTACAAATTTGAGagcggttacatttctccagcgcCATCCCTCAACTTTTAACAGAAACAGGGGGCGGAGAGAACTCTTTGTCATTGTTTCAACTACTGATCGCCCCTTTAAACTAAAGTATGTTCAAAACGGCAAATAGAATGCACAAATCAATATCAAAAGCACTATTCCATAGCTCAGTATCCTCATGTTTTATTGACCTAACTACAGTACATTGGCACACCTCAACAAACACTACTCACCATCATGTAAACCTACCATCATTTCCTACAACTGTACCAGTATGTCCAAGATACATCGTCTCATTTACACGATCCCACTCCCCtccacaaaaaaacatcaatAAATTAGATATTTATACACAATTATTTTTGAAGTGATAGATATGATAAGTCATTGGATGGCAAACGACATGTGAGGTTTCAAAATGAAGACTCATCAGGGGAATCGCTGGCTAATTGATATGATGAACAGCACTGCTCTCCCAACATCCAGACACCTGAGGAAAGGGACACTTTCTAAATGAGGGGGACTGAAGGAAATAAGAATAATCCTCATCCACATAGTTAACAAAAGAAAGGCCCatttttgattatttttttttaaacagtaaaTGTAATGGCTGTGGTTGTGTCTATGTGAGAACATTGAGGTAACGTAGACCCCACATTGGATGTGTGACCAAACACATTCTTGCTCCAAAGTCAATTTACATACACTCCACATCGCTCCTGTTAAGTAGCTGCAGTCCATTCCGGAAATTATTCAGagccattgactttttccaccttttgttatgttacagccttatcctaaaatagattaaataaataaaaaaatccttgtaaatctacacacaatacccccataaagatcatccttgagatgtttctacaacttgatcggagtccacccgtggtaaattctattgattggacattatttggaaaggcacacacctgtctatataaaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccgtagagctccgaggcaggattttgtcgaggcacagatctggggaagggtaccaaaaacattctgcagcattgaaggtcctaaaGAACagagtggtctccatcattcttaaatggaagaagttcggaaccaccaagactcttcctagggggtgaagggccttgctcagagaggttaacaagaacccgatgatcatgctgacagagttacagagttcctctgtggagatgggagaaccttccagaaggacaaccatctctgtagcactccaccaatcagatctttatggtagagtggccagatggaagccactcctcagtaaaaggcacacgacagcccacttggagtttgccaaaaggcacccataGGACTCtcaaccatgagaaacaagattctctggtctgatgaaaccaagattgaactctttggcctgaatgccaagcgtcacgtctggagaaaacatggcaccatccctacggtgaagcatggtggtggcagcattatgctgtggatatgtttttcagcggcagggactgggagactactcaggatcgagggaaagatgaacggagcaaagtacagagcgatccttgatgaaaacctgaaaACCTGttgcagagcgctcaggaccccacactggggcgaaggttcactttccaacaggacaaagaccctaagcacacagccaagacagagcaggagtggcttcgggacaagttcttgaatgtccttgagtggcccagccagagcccggacttgaacccgatcgaacatctttggagtgacctgaaaatagctgtgcagagtttgagaggatctgcagagaatgggagaaactccccaaatacaggtgtgccaagcttgtagcgtcatacccaagaagactcaaggctgtaatcgttgccaaagatgtttcaacaaagtaccgagtaaaagggtctgaatacttatttaaatgtgatatttacgtgttttatttttaataaattagcaaaaacctgtttttgctttgtcattatggggtcttgtgtgtaaattgataagGGGAATACAAATTTGATTTAAtacactttagaataaggctgaaacgtaacataattagaaaaaagtcaaggggtctgaatactttcagaatgcccTGTATAGCAGTCCACACACCGCAGGACCTAAGGTCCTGATTCCACACAAGCAGATCTGACCAGACTACAAAGCTTTCCAGGATTCTGATCTTGGATCAGTTACATGTGATGCGTCGGTGGCTCAGGCCGCTGCTCGGATATATAATTCTAAATCCAGCTAAACTGATTGGAAGGTGGTCATCCAAGCAGCACGGTCTTAATCTGATCCCGGGACAGGCACATCTGAGCAGCCTATTCAGTGAAACTGATATGGGATAGTGGTGGAGGTGGGAGGGAGACGAGGTGAATGGTGGTTTGGAAATAACATCCGAGATCAGCAGATCTGGGCGGCCTGTTCGTTGACGGCGCACCGGGCCTGATGGACCCTGGTGCAGGAGGACGTGTGACGGTTGAAGCTGTCCCGCCACATGAAGCGTTTGGCGCACAGGCTGCACTCGTAGGGCTTGACGCCCGTGTGAATCTTCATGTGGCCGACCAGGTGGTGTTTCATCTTGAAACTTTTGCCACACACGGCGCAGCCGTACGGCCGCAAGCCCAGGTGCATGCTCATGTGCCGGTCCCGCTGGCTCTTGTGAGTGAAGCTCTTGCCACACTGGCAGGGGTACAGCTTGTAGACCACTGAGGCGAAGCCAGAGTGGGAGGTCTCTTCCTGGAGGCCACCAGGGGTTccttctcctccaccaccactctcCTCAACCCCGGTTGCCTCTTCTAACAGGTCCTCTTTCAGTCCAAGCGGTGTCCCGTCGGCCTTGTCGGTGGAGAAGCCCTCTATGGAGGTACCGTAGAAGTCCAGAGGATCCTCCTCCAGGCTCTCCTCCAGCTGAGCCACCGGTTTCTCATCAATGCCGTGGTCCAGGGAGCTCCTGCTGGCTGAGGCCTGGGAGTGGGTAAGTTTCAGCTGCTCAGGGTCAGTGACAGCAGGGTCCCCGCTAAAGAGGGCCACATCGCCCTTGCAATCTGCGCGCCTTTCTGACTTTACGTGGACCCATTTCCTGTGGCCCATGATGCTGGGTGGGACATAGGCAGGTCTGGAGTACTGGTAGTCCCCCTCGCCACCCTCTTCAACGTCCCCATCCTGGCTGGCGACCTCACTACCTGAGCCATCGTGGTCGACCGGTGGCGAGCAGCTTCCGCTGGGCTGGGTGCTGTTGTTCTCCAGAGTGGGAGGGGAGAAGCTGTTCTCCAGGAGCTGGTCCATCTCCATTTTGGCAAAGCCCTctactgctcctcctcctccaccatcctcCAGGCCCATGGAGCCGTCCCCAGGGCTGTGGTAGTTACTGTCCCCAGGGAAAGGCCTGTCCCTCAGCCCACCAGAAGACTTGTGCACTAATGTGCTAGCGCCGCTTCCTACCACCTCTAAGAGCTCAGTGCATTTGTCCACCACGTGCCACATCTGGAGGAAGCTAGCTGCCGTGAGGAAAGCTACCACCTCGCCGGCAGGTAGGTGCAGGGTGCCCGTGTAGCAAGAGAGGAGGAGACGTTCGAACACGCACGGGTGCATGACGTCAGGTAAAACGCAGCGGGCACTGTTTTTAAGGAGCACTTGGTCGCAAAAGTAGGGCGAACTGGCGGCCAAGATGGCCCGGTGAGCACGGTACTGGTGTCCCTGGATGACTACGATGATGTCACAGAGCTGGCCCCTCTGCCGCTGCTGGTTGAGCTTCTGCAGCATGGTTCCGGAGAAGTTTGGGAAGTCCACGCGGAGCACATTCCCC
>TU411795
GTTTCAACTACTGATCGCCCCTTTAAACTAAAGTATGTTCAAAACGGCAAATAGAATGCACAAATCAATATCAAAAGCACTATTCCATAGCTCAGTATCCTCATGTTTTATTGACCTAACTACAGTACATTGGCACACCTCAACAAACACTACTCACCATCATGTAAACCTACCATCATTTCCTACAACTGTACCAGTATGTCCAAGATACATCGTCTCATTTACACGATCCCACTCCCCtccacaaaaaaacatcaatAAATTAGATATTTATACACAATTATTTTTGAAGTGATAGATATGATAAGTCATTGGATGGCAAACGACATGTGAGGTTTCAAAATGAAGACTCATCAGGGGAATCGCTGGCTAATTGATATGATGAACAGCACTGCTCTCCCAACATCCAGACACCTGAGGAAAGGGACACTTTCTAAATGAGGGGGACTGAAGGAAATAAGAATAATCCTCATCCACATAGTTAACAAAAGAAAGGCCCatttttgattatttttttttaaacagtaaaTGTAATGGCTGTGGTTGTGTCTATGTGAGAACATTGAGGTAACGTAGACCCCACATTGGATGTGTGACCAAACACATTCTTGCTCCAAAGTCAATTTACATACACTCCACATCGCTCCTGTTAAGTAGCTGCAGTCCATTCCGGAAATTATTCAGagccattgactttttccaccttttgttatgttacagccttatcct
>TU411798
GTTTCAACTACTGATCGCCCCTTTAAACTAAAGTATGTTCAAAACGGCAAATAGAATGCACAAATCAATATCAAAAGCACTATTCCATAGCTCAGTATCCTCATGTTTTATTGACCTAACTACAGTACATTGGCACACCTCAACAAACACTACTCACCATCATGTAAACCTACCATCATTTCCTACAACTGTACCAGTATGTCCAAGATACATCGTCTCATTTACACGATCCCACTCCCCtccacaaaaaaacatcaatAAATTAGATATTTATACACAATTATTTTTGAAGTGATAGATATGATAAGTCATTGGATGGCAAACGACATGTGAGGTTTCAAAATGAAGACTCATCAGGGGAATCGCTGGCTAATTGATATGATGAACAGCACTGCTCTCCCAACATCCAGACACCTGAGGAAAGGGACACTTTCTAAATGAGGGGGACTGAAGGAAATAAGAATAATCCTCATCCACATAGTTAACAAAAGAAAGGCCCatttttgattatttttttttaaacagtaaaTGTAATGGCTGTGGTTGTGTCTATGTGAGAACATTGAGGTAACGTAGACCCCACATTGGATGTGTGACCAAACACATTCTTGCTCCAAAGTCAATTTACATACACTCCACATCGCTCCTGTTAAGTAGCTGCAGTCCATTCCGGAAATTATTCAGagccattgactttttccaccttttgttatgttacagccttatcctaaaatagattaaataaataaaaaaatccttgtaaatctacacacaatacccccataaagatcatccttgagatgtttctacaacttgatcggagtccacccgtggtaaattctattgattggacattatttggaaaggcacacacctgtctatataaaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccgtagagctccgaggcaggattttgtcgaggcacagatctggggaagggtaccaaaaacattctgcagcattgaaggtcctaaaGAACagagtggtctccatcattcttaaatggaagaagttcggaaccaccaagactcttcctagggggtgaagggccttgctcagagaggttaacaagaacccgatgatcatgctgacagagttacagagttcctctgtggagatgggagaaccttccagaaggacaaccatctctgtagcactccaccaatcagatctttatggtagagtggccagatggaagccactcctcagtaaaaggcacacgacagcccacttggagtttgccaaaaggcacccataGGACTCtcaaccatgagaaacaagattctctggtctgatgaaaccaagattgaactctttggcctgaatgccaagcgtcacgtctggagaaaacatggcaccatccctacggtgaagcatggtggtggcagcattatgctgtggatatgtttttcagcggcagggactgggagactactcaggatcgagggaaagatgaacggagcaaagtacagagcgatccttgatgaaaacctgaaaACCTGttgcagagcgctcaggaccccacactggggcgaaggttcactttccaacaggacaaagaccctaagcacacagccaagacagagcaggagtggcttcgggacaagttcttgaatgtccttgagtggcccagccagagcccggacttgaacccgatcgaacatctttggagtgacctgaaaatagctgtgcagagtttgagaggatctgcagagaatgggagaaactccccaaatacaggtgtgccaagcttgtagcgtcatacccaagaagactcaaggctgtaatcgttgccaaagatgtttcaacaaagtaccgagtaaaagggtctgaatacttatttaaatgtgatatttacgtgttttatttttaataaattagcaaaaacctgtttttgctttgtcattatggggtcttgtgtgtaaattgataagGGGAATACAAATTTGATTTAAtacactttagaataaggctgaaacgtaacataattagaaaaaagtcaaggggtctgaatactttcagaatgcccTGTATAGCAGTCCACACACCGCAGGACCTAAGGTCCTGATTCCACACAAGCAGATCTGACCAGACTACAAAGCTTTCCAGGATTCTGATCTTGGATCAGTTACATGTGATGCGTCGGTGGCTCAGGCCGCTGCTCGGATATATAATTCTAAATCCAGCTAAACTGATTGGAAGGTGGTCATCCAAGCAGCACGGTCTTAATCTGATCCCGGGACAGGCACATCTGAGCAGCCTATTCAGTGAAACTGATATGGGATAGTGGTGGAGGTGGGAGGGAGACGAGGTGAATGGTGGTTTGGAAATAACATCCGAGATCAGCAGATCTGGGCGGCCTGTTCGTTGACGGCGCACCGGGCCTGATGGACCCTGGTGCAGGAGGACGTGTGACGGTTGAAGCTGTCCCGCCACATGAAGCGTTTGGCGCACAGGCTGCACTCGTAGGGCTTGACGCCCGTGTGAATCTTCATGTGGCCGACCAGGTGGTGTTTCATCTTGAAACTTTTGCCACACACGGCGCAGCCGTACGGCCGCAAGCCCAGGTGCATGCTCATGTGCCGGTCCCGCTGGCTCTTGTGAGTGAAGCTCTTGCCACACTGGCAGGGGTACAGCTTGTAGACCACTGAGGCGAAGCCAGAGTGGGAGGTCTCTTCCTGGAGGCCACCAGGGGTTccttctcctccaccaccactctcCTCAACCCCGGTTGCCTCTTCTAACAGGTCCTCTTTCAGTCCAAGCGGTGTCCCGTCGGCCTTGTCGGTGGAGAAGCCCTCTATGGAGGTACCGTAGAAGTCCAGAGGATCCTCCTCCAGGCTCTCCTCCAGCTGAGCCACCGGTTTCTCATCAATGCCGTGGTCCAGGGAGCTCCTGCTGGCTGAGGCCTGGGAGTGGGTAAGTTTCAGCTGCTCAGGGTCAGTGACAGCAGGGTCCCCGCTAAAGAGGGCCACATCGCCCTTGCAATCTGCGCGCCTTTCTGACTTTACGTGGACCCATTTCCTGTGGCCCATGATGCTGGGTGGGACATAGGCAGGTCTGGAGTACTGGTAGTCCCCCTCGCCACCCTCTTCAACGTCCCCATCCTGGCTGGCGACCTCACTACCTGAGCCATCGTGGTCGACCGGTGGCGAGCAGCTTCCGCTGGGCTGGGTGCTGTTGTTCTCCAGAGTGGGAGGGGAGAAGCTGTTCTCCAGGAGCTGGTCCATCTCCATTTTGGCAAAGCCCTctactgctcctcctcctccaccatcctcCAGGCCCATGGAGCCGTCCCCAGGGCTGTGGTAGTTACTGTCCCCAGGGAAAGGCCTGTCCCTCAGCCCACCAGAAGACTTGTGCACTAATGTGCTAGCGCCGCTTCCTACCACCTCTAAGAGCTCAGTGCATTTGTCCACCACGTGCCACATCTGGAGGAAGCTAGCTGCCGTGAGGAAAGCTACCACCTCGCCGGCAGGTAGGTGCAGGGTGCCCGTGTAGCAAGAGAGGAGGAGACGTTCGAACACGCACGGGTGCATGACGTCAGGTAAAACGCAGCGGGCACTGTTTTTAAGGAGCACTTGGTCGCAAAAGTAGGGCGAACTGGCGGCCAAGATGGCCCGGTGAGCACGGTACTGGTGTCCCTGGATGACTACGATGATGTCACAGAGCTGGCCCCTCTGCCGCTGCTGGTTGAGCTTCTGCAGCATGGTTCCGGAGAAGTTTGGGAAGTCCACGCGGAGCACATTCCCC

Function

symbol description
zbtb43 Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZBTB43 (zinc finger and BTB domain containing 43).

NR:

description
zinc finger and BTB domain-containing protein 43-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411797 False 3894 TUCP 0.50 1 7185926 7189819
TU411795 False 729 lncRNA 0.38 1 7186030 7186758
TU411798 True 3790 TUCP 0.50 1 7186030 7189819

Neighbor

gene id symbol gene type direction distance location
LOC118964554 angptl2 coding upstream 154048 7002452 ~ 7031982 (+)
LOC110523126 LOC106572095 coding upstream 630536 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 1425082 5672649 ~ 5760948 (+)
LOC110524936 NA coding upstream 1608090 5577014 ~ 5577940 (+)
LOC110524934 LOC106572350 coding upstream 1727165 5417468 ~ 5458865 (+)
LOC118964556 NA coding downstream 544226 7730984 ~ 7741925 (+)
mapkap1 mapkap1 coding downstream 555489 7742247 ~ 7868565 (+)
slc27a6 slc27a6 coding downstream 1063401 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 1104097 8290855 ~ 8307147 (+)
LOC110524944 adamts19 coding downstream 1196887 8383645 ~ 8507630 (+)
G362298 NA non-coding upstream 1364 7180809 ~ 7184666 (+)
G362327 NA non-coding upstream 5717 7179060 ~ 7180313 (+)
G362324 NA non-coding upstream 10962 7174858 ~ 7175068 (+)
G362320 NA non-coding upstream 14186 7171615 ~ 7171844 (+)
G362316 NA non-coding upstream 17542 7167556 ~ 7168488 (+)
G362328 NA non-coding downstream 3817 7190575 ~ 7190840 (+)
G362330 NA non-coding downstream 5049 7191807 ~ 7192058 (+)
G362368 NA non-coding downstream 88895 7275653 ~ 7277272 (+)
G362426 NA non-coding downstream 202009 7388767 ~ 7392251 (+)
G362432 NA non-coding downstream 217796 7404554 ~ 7405342 (+)
G361671 NA other upstream 1258104 5803828 ~ 5927926 (+)
G360985 NA other upstream 1886627 5296870 ~ 5299403 (+)
G360276 sync other upstream 2538030 4639016 ~ 4648000 (+)
G360287 NA other upstream 2638174 4547035 ~ 4547856 (+)
G360261 NA other upstream 2765961 4419741 ~ 4420069 (+)
G362554 NA other downstream 503682 7690440 ~ 7692514 (+)
G362662 NA other downstream 732164 7918922 ~ 7919565 (+)
cdc42se2 cdc42se2 other downstream 1588574 8775134 ~ 8849107 (+)
G364850 NA other downstream 2042080 9228838 ~ 9229231 (+)
G365197 NA other downstream 2661945 9848703 ~ 9849154 (+)

Expression


Co-expression Network