G364118



Basic Information


Item Value
gene id G364118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 7839668 ~ 7845809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU413940
cctgtatatagcctccacattgactctgtaccggtacccccctgtatatagcctccacactgactcagtaccggtaccccctgtatatagcctccacattgactctgtactggtaccccctgtatatagtctccacattgactctgtaccgtaataccctgtatatagtctccacatagactctgtaccgtaacaccctgtatatagcctccacactgactctgtaccagtaccccctgtatatagcctccttaatgttaatttattgtgttatttttttataACTGTTTCTTGAACTGTTGGTTATGGATTTGTactgtaagttagcatttcacgataaggtcTTACACCTGAATTcgccgcatgtgacaaagtttgatttgattttcatttGATGACCCTATCAATCGCATTGCCTTACAAAACAGGCACGGGTTGGCACCATGAAGCAAACATGTCAAGAATATGACCACACAACCAAATTAGTGGATTACATAACGAAAATCTGTAACAGAGGCAATGAAAGAGACACTGTGACAACTACAGTTCTAACTTCCACTCAGTGTCGATAAGCAGCATTCCCCCCCCATcccttccccccctcctccttc

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU413940 True 611 lncRNA 0.43 2 7839668 7845809

Neighbor


gene id symbol gene type direction distance location
LOC110523137 pbx3 coding downstream 117541 7593362 ~ 7722127 (-)
mvb12ba mvb12b coding downstream 402749 7394813 ~ 7436919 (-)
LOC110523135 lmx1b coding downstream 471871 7272318 ~ 7367797 (-)
LOC110523134 zbtb43 coding downstream 645234 7187898 ~ 7194434 (-)
LOC118964555 NA coding downstream 963744 6875316 ~ 6875924 (-)
LOC110524943 fbn2 coding upstream 36580 7882389 ~ 8204518 (-)
LOC110523142 LOC106571805 coding upstream 360682 8206491 ~ 8229291 (-)
hint1 hint1 coding upstream 915022 8760831 ~ 8765948 (-)
LOC110524946 LOC106571878 coding upstream 1011808 8857617 ~ 8864575 (-)
syk syk coding upstream 1299328 9145137 ~ 9199533 (-)
G364113 NA non-coding downstream 17171 7822040 ~ 7822497 (-)
G364109 NA non-coding downstream 26735 7799915 ~ 7812933 (-)
G364044 NA non-coding downstream 101576 7697082 ~ 7738092 (-)
G364037 NA non-coding downstream 152619 7686359 ~ 7687049 (-)
G364007 NA non-coding downstream 212627 7625556 ~ 7627041 (-)
G364157 NA non-coding upstream 72989 7918798 ~ 7919225 (-)
G364166 NA non-coding upstream 90135 7935944 ~ 7938576 (-)
G364174 NA non-coding upstream 156478 8002287 ~ 8020984 (-)
G364184 NA non-coding upstream 196497 8042306 ~ 8042507 (-)
G364190 NA non-coding upstream 200798 8046607 ~ 8047068 (-)
LOC110524941 LOC106572051 other downstream 1113688 6562531 ~ 6726634 (-)
G363470 LOC106572095 other downstream 1284953 6543675 ~ 6554715 (-)
LOC110523123 LOC106572171 other downstream 1885417 5945164 ~ 5954687 (-)
G361170 NA other downstream 2757800 5080578 ~ 5081868 (-)
G360703 NA other downstream 3099966 4738312 ~ 4739702 (-)
G364322 NA other upstream 457458 8303267 ~ 8304183 (-)
G364754 NA other upstream 1201733 9047542 ~ 9099000 (-)
G365752 NA other upstream 1343860 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 4288243 12134052 ~ 12136790 (-)
G368921 NA other upstream 4859757 12705566 ~ 12706092 (-)

Expression



Co-expression Network