G362670


Basic Information

Item Value
gene id G362670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 7934713 ~ 7953232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412278
aggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtacctgacgttacatcaggtgtttctatagtcgtacccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttatatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcatatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcatatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtggtatccaacgttacatcaggtgtttctatagtcgtacctgacatcaggtgtttctatagtcatatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctatagtcgtatccaacgttacatcaggtgtttctat

Function

NR:

description
flocculation protein FLO11-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412278 True 799 lncRNA 0.39 2 7934713 7953232

Neighbor

gene id symbol gene type direction distance location
mapkap1 mapkap1 coding upstream 66148 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 192788 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 902731 7002452 ~ 7031982 (+)
LOC110523126 LOC106572095 coding upstream 1379219 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 2173765 5672649 ~ 5760948 (+)
slc27a6 slc27a6 coding downstream 296927 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 337623 8290855 ~ 8307147 (+)
LOC110524944 adamts19 coding downstream 430413 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 557401 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 564024 8517256 ~ 8701336 (+)
G362668 NA non-coding upstream 8404 7926092 ~ 7926309 (+)
G362664 NA non-coding upstream 9646 7921424 ~ 7925067 (+)
G362633 NA non-coding upstream 46475 7887256 ~ 7888238 (+)
G362617 NA non-coding upstream 111266 7822978 ~ 7823447 (+)
G362601 NA non-coding upstream 153777 7780391 ~ 7780936 (+)
G362676 NA non-coding downstream 656 7953888 ~ 7956943 (+)
G362685 NA non-coding downstream 88728 8041960 ~ 8042236 (+)
G362697 NA non-coding downstream 117672 8070904 ~ 8071110 (+)
G362698 NA non-coding downstream 118374 8071606 ~ 8071953 (+)
G362704 NA non-coding downstream 126935 8080167 ~ 8080378 (+)
G362662 NA other upstream 15148 7918922 ~ 7919565 (+)
G362554 NA other upstream 242199 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 744894 7185926 ~ 7189819 (+)
G361671 NA other upstream 2006787 5803828 ~ 5927926 (+)
G360985 NA other upstream 2635310 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 822100 8775134 ~ 8849107 (+)
G364850 NA other downstream 1275606 9228838 ~ 9229231 (+)
G365197 NA other downstream 1895471 9848703 ~ 9849154 (+)
G366748 NA other downstream 3023450 10976682 ~ 10977152 (+)
G366973 NA other downstream 3472410 11425642 ~ 11428710 (+)

Expression


Co-expression Network