G362737 (LOC100846954)


Basic Information

Item Value
gene id G362737
gene name LOC100846954
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8143079 ~ 8143371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412354
GGGACCATAGTCaacaagaaaacaattggtaacacactacgccgtgaaggactgaaatcctgcagcgcccgcaagatccccctgctcaagaaagcacatatacatgcccgtctgaatgattcagaggacaactggatgaaagtgttgtggtcagatgagaccaaaatggagctctttggcatcaactcaactcgccgtgtttggaggaggaggaatgctgcctatgaccccaagaacaccatccccaccgtcaaacatggaggtggaaacat

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412354 True 272 lncRNA 0.50 2 8143079 8143371

Neighbor

gene id symbol gene type direction distance location
mapkap1 mapkap1 coding upstream 274514 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 401154 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1111097 7002452 ~ 7031982 (+)
LOC110523126 LOC106572095 coding upstream 1587585 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 2382131 5672649 ~ 5760948 (+)
slc27a6 slc27a6 coding downstream 106788 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 147484 8290855 ~ 8307147 (+)
LOC110524944 adamts19 coding downstream 240274 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 367262 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 373885 8517256 ~ 8701336 (+)
G362736 NA non-coding upstream 261 8142441 ~ 8142818 (+)
G362735 NA non-coding upstream 690 8142150 ~ 8142389 (+)
G362733 NA non-coding upstream 2141 8140625 ~ 8140938 (+)
G362726 NA non-coding upstream 13242 8129634 ~ 8129837 (+)
G362722 NA non-coding upstream 17063 8125740 ~ 8126016 (+)
G362745 NA non-coding downstream 26701 8170072 ~ 8170297 (+)
G362747 NA non-coding downstream 28921 8172292 ~ 8172550 (+)
G362748 NA non-coding downstream 29566 8172937 ~ 8173634 (+)
G362750 NA non-coding downstream 39315 8182686 ~ 8182947 (+)
G362760 NA non-coding downstream 60940 8204311 ~ 8204782 (+)
G362662 NA other upstream 223514 7918922 ~ 7919565 (+)
G362554 NA other upstream 450565 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 953260 7185926 ~ 7189819 (+)
G361671 NA other upstream 2215153 5803828 ~ 5927926 (+)
G360985 NA other upstream 2843676 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 631961 8775134 ~ 8849107 (+)
G364850 NA other downstream 1085467 9228838 ~ 9229231 (+)
G365197 NA other downstream 1705332 9848703 ~ 9849154 (+)
G366748 NA other downstream 2833311 10976682 ~ 10977152 (+)
G366973 NA other downstream 3282271 11425642 ~ 11428710 (+)

Expression


Co-expression Network