G362748


Basic Information

Item Value
gene id G362748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8172937 ~ 8173634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412365
cataaggaagtggatggttgCAAAAtgttacttttaaactcggacaaaacagagatgcttgttctaggtcccaagaaacaaagagatcttctgttgaatctgacaactaatcttgatggttgtacagttgtctcaaataaaactgtgaaggacctcggcgttactctggaccctgatctctcttttgacgaacatatcaagactgtttcaaggacagcttttttccatttacgtaacattgcaaaaatccgaCATTTTCTGTCAAAAAactatgcagaaaaatgaatccatgcttttgttacttctaggttagactactgcaatgctctactttccggctacccggattaagcactaaataaacttcagttagtgctaaatacggctgctagaatcctgactagaaccaaaaaatgtgatcatattactccagtgctagcctccctacactggcttcctgttaaggcaagggctgatttcaaggttttactgctaacctacaaagcattacatgggcttgctgctacctatctttctgatttggtcttgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggctttctcctatagagctcaattttactggtgctcttccatgccgtccctaggaggggtgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412365 True 698 lncRNA 0.42 1 8172937 8173634

Neighbor

gene id symbol gene type direction distance location
mapkap1 mapkap1 coding upstream 304372 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 431012 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1140955 7002452 ~ 7031982 (+)
LOC110523126 LOC106572095 coding upstream 1617443 6488402 ~ 6555494 (+)
LOC110522836 LOC105008486 coding upstream 2411989 5672649 ~ 5760948 (+)
slc27a6 slc27a6 coding downstream 76525 8250159 ~ 8289257 (+)
isoc1 isoc1 coding downstream 117221 8290855 ~ 8307147 (+)
LOC110524944 adamts19 coding downstream 210011 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 336999 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 343622 8517256 ~ 8701336 (+)
G362747 NA non-coding upstream 387 8172292 ~ 8172550 (+)
G362745 NA non-coding upstream 2640 8170072 ~ 8170297 (+)
G362737 LOC100846954 non-coding upstream 29566 8143079 ~ 8143371 (+)
G362736 NA non-coding upstream 30119 8142441 ~ 8142818 (+)
G362735 NA non-coding upstream 30548 8142150 ~ 8142389 (+)
G362750 NA non-coding downstream 9052 8182686 ~ 8182947 (+)
G362760 NA non-coding downstream 30677 8204311 ~ 8204782 (+)
G362761 NA non-coding downstream 31666 8205300 ~ 8205655 (+)
G362783 NA non-coding downstream 57292 8230926 ~ 8231463 (+)
G362784 NA non-coding downstream 58302 8231936 ~ 8301026 (+)
G362662 NA other upstream 253372 7918922 ~ 7919565 (+)
G362554 NA other upstream 480423 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 983118 7185926 ~ 7189819 (+)
G361671 NA other upstream 2245011 5803828 ~ 5927926 (+)
G360985 NA other upstream 2873534 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 601698 8775134 ~ 8849107 (+)
G364850 NA other downstream 1055204 9228838 ~ 9229231 (+)
G365197 NA other downstream 1675069 9848703 ~ 9849154 (+)
G366748 NA other downstream 2803048 10976682 ~ 10977152 (+)
G366973 NA other downstream 3252008 11425642 ~ 11428710 (+)

Expression


Co-expression Network