Gene
RNA
| Item | Value |
|---|---|
| gene id | G364318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8305251 ~ 8307147 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| isochorismatase domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU414154 | True | 269 | lncRNA | 0.48 | 2 | 8305251 | 8307147 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523142 | LOC106571805 | coding | downstream | 75960 | 8206491 ~ 8229291 (-) |
| LOC110524943 | fbn2 | coding | downstream | 100733 | 7882389 ~ 8204518 (-) |
| LOC110523137 | pbx3 | coding | downstream | 583124 | 7593362 ~ 7722127 (-) |
| mvb12ba | mvb12b | coding | downstream | 868332 | 7394813 ~ 7436919 (-) |
| LOC110523135 | lmx1b | coding | downstream | 937454 | 7272318 ~ 7367797 (-) |
| hint1 | hint1 | coding | upstream | 453684 | 8760831 ~ 8765948 (-) |
| LOC110524946 | LOC106571878 | coding | upstream | 550470 | 8857617 ~ 8864575 (-) |
| syk | syk | coding | upstream | 837990 | 9145137 ~ 9199533 (-) |
| LOC110523157 | lyz2 | coding | upstream | 996497 | 9303644 ~ 9306869 (-) |
| LOC118964557 | lyz2 | coding | upstream | 1011378 | 9318525 ~ 9321762 (-) |
| G364312 | NA | non-coding | downstream | 16015 | 8286015 ~ 8289236 (-) |
| G364259 | NA | non-coding | downstream | 108945 | 8195821 ~ 8196306 (-) |
| G364257 | NA | non-coding | downstream | 110117 | 8188808 ~ 8195134 (-) |
| G364255 | NA | non-coding | downstream | 125761 | 8179261 ~ 8179490 (-) |
| G364251 | NA | non-coding | downstream | 134892 | 8170041 ~ 8170359 (-) |
| G364323 | NA | non-coding | upstream | 2491 | 8309638 ~ 8310134 (-) |
| G364324 | NA | non-coding | upstream | 3175 | 8310322 ~ 8310541 (-) |
| G364325 | NA | non-coding | upstream | 4131 | 8311278 ~ 8311522 (-) |
| G364326 | NA | non-coding | upstream | 4622 | 8311769 ~ 8312046 (-) |
| G364328 | NA | non-coding | upstream | 7398 | 8314545 ~ 8314942 (-) |
| G364322 | NA | other | downstream | 1068 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 1579271 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 1750536 | 6543675 ~ 6554715 (-) |
| LOC110523123 | LOC106572171 | other | downstream | 2351000 | 5945164 ~ 5954687 (-) |
| G361170 | NA | other | downstream | 3223383 | 5080578 ~ 5081868 (-) |
| G364754 | NA | other | upstream | 740395 | 9047542 ~ 9099000 (-) |
| G365752 | NA | other | upstream | 882522 | 9189669 ~ 9190098 (-) |
| G368612 | ctxn3 | other | upstream | 3826905 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 4398419 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 5900043 | 14207190 ~ 14208705 (-) |
