G362824


Basic Information

Item Value
gene id G362824
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8319859 ~ 8320162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412453
atgacatttgtaatgtctttattgttttgaaacttctgtatgtgtaatgtttactgttaatttgtattgtttatttcacttttgtatattatctacctcacttgctttggcaatgttaacacatgtttcccatgccaataaagccccttgaattgaattgaattgagagagacagagagggagagagagagagagagagagagagagagagagagagaaagcacaccTTTGTTAATGTACCAGTTAGCAGGGTACATTGTGGGGTCCTTCAAGTGAATGACTAATTTCACAGCCCCACGTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412453 True 304 lncRNA 0.38 1 8319859 8320162

Neighbor

gene id symbol gene type direction distance location
isoc1 isoc1 coding upstream 12844 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 30602 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 451294 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 577934 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1287877 7002452 ~ 7031982 (+)
LOC110524944 adamts19 coding downstream 63483 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 190471 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 197094 8517256 ~ 8701336 (+)
LOC118964742 NA coding downstream 387577 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 449622 8769784 ~ 8772389 (+)
G362819 NA non-coding upstream 4007 8315649 ~ 8315852 (+)
G362815 NA non-coding upstream 7429 8312125 ~ 8312430 (+)
G362814 NA non-coding upstream 8292 8311250 ~ 8311567 (+)
G362812 NA non-coding upstream 9643 8309554 ~ 8310216 (+)
G362827 NA non-coding downstream 3126 8323288 ~ 8323490 (+)
G362832 NA non-coding downstream 11925 8332087 ~ 8332601 (+)
G362840 NA non-coding downstream 27848 8348010 ~ 8348224 (+)
G362843 NA non-coding downstream 30083 8350245 ~ 8350504 (+)
G362846 NA non-coding downstream 31169 8351331 ~ 8351732 (+)
G362662 NA other upstream 400294 7918922 ~ 7919565 (+)
G362554 NA other upstream 627345 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1130040 7185926 ~ 7189819 (+)
G361671 NA other upstream 2391933 5803828 ~ 5927926 (+)
G360985 NA other upstream 3020456 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 455170 8775134 ~ 8849107 (+)
G364850 NA other downstream 908676 9228838 ~ 9229231 (+)
G365197 NA other downstream 1528541 9848703 ~ 9849154 (+)
G366748 NA other downstream 2656520 10976682 ~ 10977152 (+)
G366973 NA other downstream 3105480 11425642 ~ 11428710 (+)

Expression


Co-expression Network