G362832


Basic Information

Item Value
gene id G362832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8332087 ~ 8332601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412461
ccctctcgggacgtgctggaccgtgcgctgatcgaggatttcctccgttgccgccaggtttcctcctcgagtgcgccaggaggcgctcggtgagtgggggggtactgtcatgtattgtcatgttgtgtctttctgtcctttcctttcaccctgtctccctctgctggtcgtattaggttaccttttctcccccgctttcccccagctgttccttgtctcctcctaactacccattcaccccttttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtctttgtcggattcttgtttgttgtgtttcatgcctgaaccagactatcgtcatgtttgctgtaaccttgtcctgtcctgtcggaatctgccggtctatctgagcctacctatgtttggttattaaagaagctctgtttaagttaattcgcttttgggtcctcattcactcaccgtaacaagaatgctattcattgactacagctcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412461 True 515 lncRNA 0.50 1 8332087 8332601

Neighbor

gene id symbol gene type direction distance location
isoc1 isoc1 coding upstream 25072 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 42830 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 463522 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 590162 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1300105 7002452 ~ 7031982 (+)
LOC110524944 adamts19 coding downstream 51044 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 178032 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 184655 8517256 ~ 8701336 (+)
LOC118964742 NA coding downstream 375138 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 437183 8769784 ~ 8772389 (+)
G362827 NA non-coding upstream 8597 8323288 ~ 8323490 (+)
G362824 NA non-coding upstream 11925 8319859 ~ 8320162 (+)
G362819 NA non-coding upstream 16235 8315649 ~ 8315852 (+)
G362815 NA non-coding upstream 19657 8312125 ~ 8312430 (+)
G362814 NA non-coding upstream 20520 8311250 ~ 8311567 (+)
G362840 NA non-coding downstream 15409 8348010 ~ 8348224 (+)
G362843 NA non-coding downstream 17644 8350245 ~ 8350504 (+)
G362846 NA non-coding downstream 18730 8351331 ~ 8351732 (+)
G362853 NA non-coding downstream 27568 8360169 ~ 8360381 (+)
G362855 NA non-coding downstream 28980 8361581 ~ 8365299 (+)
G362662 NA other upstream 412522 7918922 ~ 7919565 (+)
G362554 NA other upstream 639573 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1142268 7185926 ~ 7189819 (+)
G361671 NA other upstream 2404161 5803828 ~ 5927926 (+)
G360985 NA other upstream 3032684 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 442731 8775134 ~ 8849107 (+)
G364850 NA other downstream 896237 9228838 ~ 9229231 (+)
G365197 NA other downstream 1516102 9848703 ~ 9849154 (+)
G366748 NA other downstream 2644081 10976682 ~ 10977152 (+)
G366973 NA other downstream 3093041 11425642 ~ 11428710 (+)

Expression


Co-expression Network