G362855


Basic Information

Item Value
gene id G362855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8361581 ~ 8365299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412494
atttgtaccttgtcagctcggggattcaaacttgtaacctttcagttactagtccaacgctctaaccactaggctaccctgccgccccaaaacatAGGGCTTACTAGTATAATGGAGAAGTATATGGGGGAAAATGGAACGATGAAAACTTTGAGAGGTCAGATGAACCTGGACTTAATGGCCAAAGAGCACGAGAGCAAAGGAGGCTATTCAGGGAAAGAGAGCAAATGGCGCAATTATGAATGCGAGGATATTAGATCATGGGTCCGCACCCTCCATTCAGGAAAAGCACCAGACTCTGATACAGTACTGCACTGGTAAACACAAGCTGAGTTCACCACTGCTTAGgacagacaggagaaaacagACTTCACGTGAACAAAAATGCAATATGTTTATTCTCTTGGATCTGTGCATAGGGCCGACTActctacagtagtgtacactataacatagggcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacactataacATAGGGCTTACTAGTCTACAGTAGTGTGCACTATAACATAGGGCTTActagtctacagtagtgtacactataaCatagggcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacattataacatagggcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacactataaCATAGGGCTTACTAGTCTACAGTAATGTACACTATAACATAGGGCTTATTAGTCTACAGTAATGTACACTATAACATAGGGCTTACTAGTCTACAGTGGTGTACACTATAACATAGGGTTTActagtctacagtagtgtacattataacatagtgcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacagtatgacatagggcttactagtctacagtagtgtacactataacatagggcttactagtctacagtagtgtacactataaCATAGTGGGAAAAAAGTGTGAATCAGAATAACAACAGTAAACAACAACAGACCTGGAGTACAAAGGGACCACCGAACTCAGGGGGCAGATAAACAGATGGCTCATTCAGGGCCGTGAGTGAAAACATGAATACCCCCCCGACGGAGTGAAGACGCCATGCTCCGCGGCATGGAGCGTGCTGGGTCCGGGGGAAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412494 True 1277 lncRNA 0.42 3 8361581 8365299

Neighbor

gene id symbol gene type direction distance location
isoc1 isoc1 coding upstream 54566 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 72324 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 493016 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 619656 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1329599 7002452 ~ 7031982 (+)
LOC110524944 adamts19 coding downstream 18346 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 145334 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 151957 8517256 ~ 8701336 (+)
LOC118964742 NA coding downstream 342440 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 404485 8769784 ~ 8772389 (+)
G362853 NA non-coding upstream 1200 8360169 ~ 8360381 (+)
G362846 NA non-coding upstream 9849 8351331 ~ 8351732 (+)
G362843 NA non-coding upstream 11077 8350245 ~ 8350504 (+)
G362840 NA non-coding upstream 13357 8348010 ~ 8348224 (+)
G362832 NA non-coding upstream 28980 8332087 ~ 8332601 (+)
G362856 NA non-coding downstream 1368 8366667 ~ 8366923 (+)
G362859 NA non-coding downstream 5331 8370630 ~ 8370918 (+)
G362877 NA non-coding downstream 45536 8410835 ~ 8411058 (+)
G362879 NA non-coding downstream 49523 8414822 ~ 8415304 (+)
G362893 NA non-coding downstream 64950 8430249 ~ 8431428 (+)
G362662 NA other upstream 442016 7918922 ~ 7919565 (+)
G362554 NA other upstream 669067 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1171762 7185926 ~ 7189819 (+)
G361671 NA other upstream 2433655 5803828 ~ 5927926 (+)
G360985 NA other upstream 3062178 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 410033 8775134 ~ 8849107 (+)
G364850 NA other downstream 863539 9228838 ~ 9229231 (+)
G365197 NA other downstream 1483404 9848703 ~ 9849154 (+)
G366748 NA other downstream 2611383 10976682 ~ 10977152 (+)
G366973 NA other downstream 3060343 11425642 ~ 11428710 (+)

Expression


Co-expression Network