G362859


Basic Information

Item Value
gene id G362859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8370630 ~ 8370918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412501
agactatactggactatactagactagactggactatactggactggactatactatactatactggactggaATGTACTGGAATGGACtggactatactatactctactagACTCGACTAGgctatactggactggactaggctatactggactggactaggctatactggactggactaggcTATACTGGACTGGACTTCACTAGACTGGATTGAACTGTACTGGACTAGATTATACTGGACCGGACTATATTGgactatactggactggactatactatactatac

Function

NR:

description
Repetitive proline-rich cell wall protein 2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412501 True 289 lncRNA 0.43 1 8370630 8370918

Neighbor

gene id symbol gene type direction distance location
isoc1 isoc1 coding upstream 63615 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 81373 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 502065 7742247 ~ 7868565 (+)
LOC118964556 NA coding upstream 628705 7730984 ~ 7741925 (+)
LOC118964554 angptl2 coding upstream 1338648 7002452 ~ 7031982 (+)
LOC110524944 adamts19 coding downstream 12727 8383645 ~ 8507630 (+)
minar2 kiaa1024l coding downstream 139715 8510633 ~ 8515635 (+)
chsy3 chsy3 coding downstream 146338 8517256 ~ 8701336 (+)
LOC118964742 NA coding downstream 336821 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 398866 8769784 ~ 8772389 (+)
G362856 NA non-coding upstream 3707 8366667 ~ 8366923 (+)
G362855 NA non-coding upstream 5331 8361581 ~ 8365299 (+)
G362853 NA non-coding upstream 10249 8360169 ~ 8360381 (+)
G362846 NA non-coding upstream 18898 8351331 ~ 8351732 (+)
G362843 NA non-coding upstream 20126 8350245 ~ 8350504 (+)
G362877 NA non-coding downstream 39917 8410835 ~ 8411058 (+)
G362879 NA non-coding downstream 43904 8414822 ~ 8415304 (+)
G362893 NA non-coding downstream 59331 8430249 ~ 8431428 (+)
G362898 NA non-coding downstream 64154 8435072 ~ 8435320 (+)
G362951 NA non-coding downstream 166664 8537582 ~ 8538073 (+)
G362662 NA other upstream 451065 7918922 ~ 7919565 (+)
G362554 NA other upstream 678116 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1180811 7185926 ~ 7189819 (+)
G361671 NA other upstream 2442704 5803828 ~ 5927926 (+)
G360985 NA other upstream 3071227 5296870 ~ 5299403 (+)
cdc42se2 cdc42se2 other downstream 404414 8775134 ~ 8849107 (+)
G364850 NA other downstream 857920 9228838 ~ 9229231 (+)
G365197 NA other downstream 1477785 9848703 ~ 9849154 (+)
G366748 NA other downstream 2605764 10976682 ~ 10977152 (+)
G366973 NA other downstream 3054724 11425642 ~ 11428710 (+)

Expression


Co-expression Network