G364369 (adamts19)


Basic Information

Item Value
gene id G364369
gene name adamts19
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8384134 ~ 8385601 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU414215
TTGGCAGCGGACGAAACTGGCATACTGCTCCGAGATGCCTTTTGTGctttctgtctcctctccacCATGAATTTCTGGGACAGAAATCGAGTGTCTCTCTTCAGGATGAGGTGCAGGTCCCTGCCAAAAGCAGGAATTCTGAGTCTCAGCCCTGTGGAAGCAGCCGTTTGCGGTCCTTGAGGTTCCCAATGGTATAGCTCTGGAGATTCGTACTCTTCCCAGTTTGAAATGGAACGAACCTCCCGAGAGCTGCTCCCGGCGCTGGCGTCAGTCTCTCGGCTTGTTGGTTTATCGGGAGCTCCGGCGCTGGCGTCAGTCTCTCGGCTAGTTGGTTTATCAGGAGCCGGTGGACCTGTATCAGGAAAAACCTCCGGGAAAATAATTTCGGACTCGGATTCCTGGAAGGGGTGTGGATCTGGAAAATAAAAATAGGAAATGAGAGAAAGAAGACAGCAAATACCATAGGATTAGTCGTTATAGTCTTTTTCAGAAAGGTCAACTGGAGCAAAGAAAATGTAGCCCATGGATGAGCCTGTCTGCACCAATAAAATGACTGAGTGATGTCTCACCTGCGCATCACTATATTAGCTAACTCAGCGAATTATAACAGTGAGAAACATCGAGAATTGTTACCATGCCTTGTGAGTACCTGATGAACTAAATCAACGTTTAAACTGCATATTGAAGGTGTTTCACATATACCTGCAATGGCAAATGCTCCAAGAAAACATAactgatggaggagactgaagatACGCTTTAGATGCATATTCAGTTATTGGTCAATTAACCTTTACAGTGTCGTTAAACAAAGTTGCTCTCCACGCACATTAGTCAAATTCTGTGTTGTCTATGCGCTGCCTGATACTTTTCCCCCATCTCCCGGTAAAtgcgcctctctcctctctcacatgAACGTGTTTCCAAATGAATGACTCCGTATCCTGCACTGTAAAAATCAAAAAGTCagcataggagagagagagagagagatttgtataGAAGTGGATTTTGATGTATGGACAGCGCGCACTGAGCGGTAGAGAGCACACTCGAGCAGTCAATACCGCAAGCTCTAAATAGCCTACTACTCAACTGCACTAAGACCAGAGAAGAATATAGCCACACGTGTTGAGTTGCTTCCTTAATTTATTGGGGAGGAGGTGTGCAAAAGAAAATACAACATGCAGGCTTCTTTTTACAGATTTAATTGGAGCATAATaaactactgtctgtctactgtagctATATATTGGAGTTATTTTTGCTCAAATTGAATGAAAACATCTCATGTCAAAATGTTGTCACTTCGTTTTCAGTTGTTTGAGTTTTCATTTAGCTTCTCACTGAACAAATGCTGGTTCTTTCCATTTAATTTCTTGG
>TU414214
GGTGTTTCACATATACCTGCAATGGCAAATGCTCCAAGAAAACATAactgatggaggagactgaagatACGCTTTAGATGCATATTCAGTTATTGGTCAATTAACCTTTACAGTGTCGTTAAACAAAGTTGCTCTCCACGCACATTAGTCAAATTCTGTGTTGTCTATGCGCTGCCTGATACTTTTCCCCCATCTCCCGGTAAAtgcgcctctctcctctctcacatgAACGTGTTTCCAAATGAATGACTCCGTATCCTGCACTGTAAAAATCAAAAAGTCagcataggagagagagagagagagatttgtataGAAGTGGATTTTGATGTATGGACAGCGCGCACTGAGCGGTAGAGAGCACACTCGAGCAGTCAATACCGCAAGCTCTAAATAGCCTACTACTCAACTGCACTAAGACCAGAGAAGAATATAGCCACACGTGTTGAGTTGCTTCCTTAATTTATTGGGGAGGAGGTGTGCAAAAGAAAATACAACATGCAGGCTTCTTTTTACAGATTTAATT
>TU414218
CAGTCCTGCGCAGGTGCTGAATGAGGCAATGGATCCTGCGTCATTGAGAACAGTTCCGCTGTAATAGCATCCTCTCTCTTCTGTGTTGGCAGCGGACGAAACTGGCATACTGCTCCGAGATGCCTTTTGTGctttctgtctcctctccacCATGAATTTCTGGGACAGAAATCGAGTGTCTCTCTTCAGGATGAGGTGCAGGTCCCTGCCAAAAGCAGGAATTCTGAGTCTCAGCCCTGTGGAAGCAGCCGTTTGCGGTCCTTGAGGTTCCCAATGGTATAGCTCTGGAGATTCGTACTCTTCCCAGTTTGAAATGGAACGAACCTCCCGAGAGCTGCTCCCGGCGCTGGCGTCAGTCTCTCGGCTTGTTGGTTTATCGGGAGCTCCGGCGCTGGCGTCAGTCTCTCGGCTAGTTGGTTTATCAGGAGCCGGTGGACCTGTATCAGGAAAAACCTCCGGGAAAATAATTTCGGACTCGGATTCCTGGAAGGGGTGTGGATCTGGAAAATAAAAATAGGAAATGAGAGAAAGAAGACAGCAAATACCATAGGATTAGTCGTTATAGTCTTTTTCAGAAAGGTCAACTGGAGCAAAGAAAATGTAGCCCATGGATGAGCCTGTCTGCACCAATAAAATGACTGAGTGATGTCTCACCTGCGCATCACTATATTAGCTAACTCAGCGAATTATAACAGTGAGAAACATCGAGAATTGTTACCATGCCTTGTGAGTACCTGATGAACTAAATCAACGTTTAAACTGCATATTGAAGGTGTTTCACATATACCTGCAATGGCAAATGCTCCAAGAAAACATAactgatggaggagactgaagatACGCTTTAGATGCATATTCAGTTATTGGTCAATTAACCTTTACAGTGTCGTTAAACAAAGTTGCTCTCCACGCACATTAGTCAAATTCTGTGTTGTCTATGCGCTGCCTGATACTTTTCCCCCATCTCCCGGTAAAtgcgcctctctcctctctcacatgAACGTGTTTCCAAATGAATGACTCCGTATCCTGCACTGTAAAAATCAAAAAGTCagcataggagagagagagagagagatttgtataGAAGTGGATTTTGATGTATGGACAGCGCGCACTGAGCGGTAGAGAGCACACTCGAGCAGTCAATACCGCAAGCTCTAAATAGCCTACTACTCAACTGCACTAAGACCAGAGAAGAATATAGCCACACGTGTTGAGTTGCTTCCTTAATTTATTGGGGAGGAGGTGTGCAAAAGAAAATACAACATGCAGGCTTCTTTTTACAGATTTAATT

Function

symbol description
adamts19 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix.

NR:

description
LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU414215 False 1383 lncRNA 0.44 1 8384134 8385516
TU414214 False 526 lncRNA 0.42 1 8384305 8384830
TU414218 True 1297 lncRNA 0.46 1 8384305 8385601

Neighbor

gene id symbol gene type direction distance location
LOC110523142 LOC106571805 coding downstream 154843 8206491 ~ 8229291 (-)
LOC110524943 fbn2 coding downstream 179616 7882389 ~ 8204518 (-)
LOC110523137 pbx3 coding downstream 662007 7593362 ~ 7722127 (-)
mvb12ba mvb12b coding downstream 947215 7394813 ~ 7436919 (-)
LOC110523135 lmx1b coding downstream 1016337 7272318 ~ 7367797 (-)
hint1 hint1 coding upstream 375230 8760831 ~ 8765948 (-)
LOC110524946 LOC106571878 coding upstream 472016 8857617 ~ 8864575 (-)
syk syk coding upstream 759536 9145137 ~ 9199533 (-)
LOC110523157 lyz2 coding upstream 918043 9303644 ~ 9306869 (-)
LOC118964557 lyz2 coding upstream 932924 9318525 ~ 9321762 (-)
G364358 NA non-coding downstream 25906 8357988 ~ 8358228 (-)
G364355 NA non-coding downstream 28805 8355104 ~ 8355329 (-)
G364350 NA non-coding downstream 33641 8350258 ~ 8350493 (-)
G364349 NA non-coding downstream 35132 8348504 ~ 8349002 (-)
G364348 NA non-coding downstream 35719 8348203 ~ 8348415 (-)
G364370 NA non-coding upstream 22 8385623 ~ 8385840 (-)
G364373 NA non-coding upstream 5087 8390688 ~ 8391145 (-)
G364377 NA non-coding upstream 9915 8395516 ~ 8396460 (-)
G364379 NA non-coding upstream 15352 8400953 ~ 8401187 (-)
G364385 NA non-coding upstream 29257 8414858 ~ 8415185 (-)
G364322 NA other downstream 79951 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 1658154 6562531 ~ 6726634 (-)
G363470 LOC106572095 other downstream 1829419 6543675 ~ 6554715 (-)
LOC110523123 LOC106572171 other downstream 2429883 5945164 ~ 5954687 (-)
G361170 NA other downstream 3302266 5080578 ~ 5081868 (-)
G364754 NA other upstream 661941 9047542 ~ 9099000 (-)
G365752 NA other upstream 804068 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 3748451 12134052 ~ 12136790 (-)
G368921 NA other upstream 4319965 12705566 ~ 12706092 (-)
G370333 NA other upstream 5821589 14207190 ~ 14208705 (-)

Expression


Co-expression Network