Gene
RNA
| Item | Value |
|---|---|
| gene id | G364377 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8395516 ~ 8396460 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106609981 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU414231 | True | 911 | lncRNA | 0.37 | 2 | 8395516 | 8396460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523142 | LOC106571805 | coding | downstream | 166225 | 8206491 ~ 8229291 (-) |
| LOC110524943 | fbn2 | coding | downstream | 190998 | 7882389 ~ 8204518 (-) |
| LOC110523137 | pbx3 | coding | downstream | 673389 | 7593362 ~ 7722127 (-) |
| mvb12ba | mvb12b | coding | downstream | 958597 | 7394813 ~ 7436919 (-) |
| LOC110523135 | lmx1b | coding | downstream | 1027719 | 7272318 ~ 7367797 (-) |
| hint1 | hint1 | coding | upstream | 364371 | 8760831 ~ 8765948 (-) |
| LOC110524946 | LOC106571878 | coding | upstream | 461157 | 8857617 ~ 8864575 (-) |
| syk | syk | coding | upstream | 748677 | 9145137 ~ 9199533 (-) |
| LOC110523157 | lyz2 | coding | upstream | 907184 | 9303644 ~ 9306869 (-) |
| LOC118964557 | lyz2 | coding | upstream | 922065 | 9318525 ~ 9321762 (-) |
| G364373 | NA | non-coding | downstream | 4371 | 8390688 ~ 8391145 (-) |
| G364370 | NA | non-coding | downstream | 9676 | 8385623 ~ 8385840 (-) |
| G364369 | adamts19 | non-coding | downstream | 9915 | 8384134 ~ 8385601 (-) |
| G364358 | NA | non-coding | downstream | 37288 | 8357988 ~ 8358228 (-) |
| G364355 | NA | non-coding | downstream | 40187 | 8355104 ~ 8355329 (-) |
| G364379 | NA | non-coding | upstream | 4493 | 8400953 ~ 8401187 (-) |
| G364385 | NA | non-coding | upstream | 18398 | 8414858 ~ 8415185 (-) |
| G364393 | NA | non-coding | upstream | 30177 | 8426637 ~ 8427140 (-) |
| G364437 | NA | non-coding | upstream | 125699 | 8522159 ~ 8524108 (-) |
| G364441 | NA | non-coding | upstream | 138373 | 8534833 ~ 8535267 (-) |
| G364322 | NA | other | downstream | 91333 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 1669536 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 1840801 | 6543675 ~ 6554715 (-) |
| LOC110523123 | LOC106572171 | other | downstream | 2441265 | 5945164 ~ 5954687 (-) |
| G361170 | NA | other | downstream | 3313648 | 5080578 ~ 5081868 (-) |
| G364754 | NA | other | upstream | 651082 | 9047542 ~ 9099000 (-) |
| G365752 | NA | other | upstream | 793209 | 9189669 ~ 9190098 (-) |
| G368612 | ctxn3 | other | upstream | 3737592 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 4309106 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 5810730 | 14207190 ~ 14208705 (-) |
