G362960



Basic Information


Item Value
gene id G362960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8574992 ~ 8578418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU412614
TCTAGTTATAAGGCCCCATAGTTACACAACCTTAACTGTCTTGGTGGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTTGTGGTTCTAGTTATAAAGCCCCATAGTAAGACAACCTTCACTGTCTTTGTGGTTCTAGTTATAAGGCCCCATAGTTACACAACCTTAACTGTCTTTGTGGTTCTAGTTATAAGGCCCCATAGTAAGACAACCTTAACTGTCTTTGTGGTTCTAGTTATAAGACCCCATAGTTACCAACCTTTACTGTCTTGTAGAATCTAGTTATAAGACCCCATAGTTACACAACCTTTACTGTCTTGTAGGATCTAGTTATAAGGCCCCATAGTTAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU412614 True 360 lncRNA 0.39 6 8574992 8578418

Neighbor


gene id symbol gene type direction distance location
minar2 kiaa1024l coding upstream 59357 8510633 ~ 8515635 (+)
LOC110524944 adamts19 coding upstream 67362 8383645 ~ 8507630 (+)
isoc1 isoc1 coding upstream 267977 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 285735 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 706427 7742247 ~ 7868565 (+)
LOC118964742 NA coding downstream 129321 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 191366 8769784 ~ 8772389 (+)
cdc42se2 cdc42se2 coding downstream 196716 8775134 ~ 8849107 (+)
sptlc1 sptlc1 coding downstream 302636 8881054 ~ 8900229 (+)
ror2 ror2 coding downstream 322334 8900752 ~ 9028540 (+)
G362959 NA non-coding upstream 1588 8573058 ~ 8573404 (+)
G362944 NA non-coding upstream 27923 8546677 ~ 8547069 (+)
G362945 NA non-coding upstream 28438 8546296 ~ 8546554 (+)
G362951 NA non-coding upstream 36919 8537582 ~ 8538073 (+)
G362898 NA non-coding upstream 139672 8435072 ~ 8435320 (+)
G362963 NA non-coding downstream 17729 8596147 ~ 8596390 (+)
G362976 NA non-coding downstream 57315 8635733 ~ 8636813 (+)
G362981 NA non-coding downstream 62619 8641037 ~ 8641258 (+)
G362983 NA non-coding downstream 63743 8642161 ~ 8642388 (+)
G362994 NA non-coding downstream 83541 8661959 ~ 8666149 (+)
G362662 NA other upstream 655427 7918922 ~ 7919565 (+)
G362554 NA other upstream 882478 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1385173 7185926 ~ 7189819 (+)
G361671 NA other upstream 2647066 5803828 ~ 5927926 (+)
G360985 NA other upstream 3275589 5296870 ~ 5299403 (+)
G364850 NA other downstream 650420 9228838 ~ 9229231 (+)
G365197 NA other downstream 1270285 9848703 ~ 9849154 (+)
G366748 NA other downstream 2398264 10976682 ~ 10977152 (+)
G366973 NA other downstream 2847224 11425642 ~ 11428710 (+)

Expression



Co-expression Network