G362961


Basic Information

Item Value
gene id G362961
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8575070 ~ 8575517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412615
CTTCACTGTCTTGGATGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGATGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGTGGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGAGGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGATGGTCTAGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGATGGTCTCGTTATAAAGCCCCATAGTTACACAACCTTCACTGTCTTGGAGGGTCTAGTTATAAAGCCCCATAGTAAGACAACCTTCACTGTCTTGGAG

Function

NR:

description
PREDICTED: proline-rich extensin-like protein EPR1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412615 True 352 lncRNA 0.43 2 8575070 8575517

Neighbor

gene id symbol gene type direction distance location
minar2 kiaa1024l coding upstream 59435 8510633 ~ 8515635 (+)
LOC110524944 adamts19 coding upstream 67440 8383645 ~ 8507630 (+)
isoc1 isoc1 coding upstream 268055 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 285813 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 706505 7742247 ~ 7868565 (+)
LOC118964742 NA coding downstream 132222 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 194267 8769784 ~ 8772389 (+)
cdc42se2 cdc42se2 coding downstream 199617 8775134 ~ 8849107 (+)
sptlc1 sptlc1 coding downstream 305537 8881054 ~ 8900229 (+)
ror2 ror2 coding downstream 325235 8900752 ~ 9028540 (+)
G362959 NA non-coding upstream 1666 8573058 ~ 8573404 (+)
G362944 NA non-coding upstream 28001 8546677 ~ 8547069 (+)
G362945 NA non-coding upstream 28516 8546296 ~ 8546554 (+)
G362951 NA non-coding upstream 36997 8537582 ~ 8538073 (+)
G362898 NA non-coding upstream 139750 8435072 ~ 8435320 (+)
G362963 NA non-coding downstream 20630 8596147 ~ 8596390 (+)
G362976 NA non-coding downstream 60216 8635733 ~ 8636813 (+)
G362981 NA non-coding downstream 65520 8641037 ~ 8641258 (+)
G362983 NA non-coding downstream 66644 8642161 ~ 8642388 (+)
G362994 NA non-coding downstream 86442 8661959 ~ 8666149 (+)
G362662 NA other upstream 655505 7918922 ~ 7919565 (+)
G362554 NA other upstream 882556 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1385251 7185926 ~ 7189819 (+)
G361671 NA other upstream 2647144 5803828 ~ 5927926 (+)
G360985 NA other upstream 3275667 5296870 ~ 5299403 (+)
G364850 NA other downstream 653321 9228838 ~ 9229231 (+)
G365197 NA other downstream 1273186 9848703 ~ 9849154 (+)
G366748 NA other downstream 2401165 10976682 ~ 10977152 (+)
G366973 NA other downstream 2850125 11425642 ~ 11428710 (+)

Expression


Co-expression Network