G362994


Basic Information

Item Value
gene id G362994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 8661959 ~ 8666149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU412653
ctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatagaacaccgtctaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacaccacctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatagaacaccgtctaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacatcacctaatagaacaccatctaatacaacaccacctaatataacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacccaatataacactgtctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacccaatataacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatagaacaccgtctaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacaccacctaatagaacaccatctaatacaacacca
>TU412654
ctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatagaacaccgtctaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacaccacctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatagaacaccgtctaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacatcacctaatagaacaccatctaatacaacaccacctaatataacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacccaatataacactgtctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacccaatataacactgtctaatagaacaccacctaatagaacaccatctaatacaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatataacactgtctaatagaacaccatctaatagaacaccacctaatataaCACCACGTAATATAACACTGtctaatagaacaccatctaatagACCACCATCTAATATAACACTGtctaatagaacaccatctaatagaacaccacctaatataacaccacctaatataacactgtctaatagaacaccacctaatataacaccacctaatataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatataacactgtctaatagaacaccacctaatataacaccacctattataacactgtctaatagaacaccatctaatacaacaccatctaatacaacactgtctaatagaacaccacctaatacaacaccacctaatataacactgtctaatataacactgtctaatagaacaccatctaatacaacaccatctaatataacaccacctaatagaacaccatctaatataacactgtctaatagaacaccatctaatacaacactgtctaatagaacaccatctaatagaacaccatctaataTAACACCACCTAATATAACACCATCTAATataacaccacctaatagaacaccacctaatagaacaccatctaatagaacaccatctatTAGAACACCATGTAATACAACACCACCTAATAaaacaccatctaatagaacaccacctaatagaacaccatctattagaacaccacctaatagaacaccatctaatagaacaccatctaatagaacaccatctatTAGAACACCATGTAatacaacaccacctaatagaacaccatctattagaacaccacctaatagaacaccatctatTAGAACACCATGTAATACAACACCACCTAATAaaacaccatctaatagaacaccacctaatagaacaccatctattagaacaccacctaatagaacaccatatattagaacaccacctaatagaacaccatctaatagaacaccatctaatgcaacaccacctaatagaacaccatctaatagaacaccatctaatacaacaccacctaatagaacaccatctaatagaacaccacctaatagaacaccacctaatagaacaccatctaatagaacaccatctaatagaacaccatGTAATAGAACACCaactaatagaacaccacctaatagaacaccacctaatagaacaccatgtaatagaacaccacctaatagaacaccacctaatacaacaccacctaatagaacacaatctaatagaacaccacctaatataacaccatctaatagaacaccacctaatagaaaaccatctaatagaacaccacctaatagaacaccacgtaatagaacaccacctaatacaacaccacctaatagaacaccatctaatagaacaccacctaatataacaccacctaata

Function

NR:

description
keratin-associated protein 4-6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412653 False 929 lncRNA 0.36 2 8661959 8664717
TU412654 True 2301 lncRNA 0.35 2 8661959 8666149

Neighbor

gene id symbol gene type direction distance location
minar2 kiaa1024l coding upstream 146324 8510633 ~ 8515635 (+)
LOC110524944 adamts19 coding upstream 154329 8383645 ~ 8507630 (+)
isoc1 isoc1 coding upstream 354944 8290855 ~ 8307147 (+)
slc27a6 slc27a6 coding upstream 372702 8250159 ~ 8289257 (+)
mapkap1 mapkap1 coding upstream 793394 7742247 ~ 7868565 (+)
LOC118964742 NA coding downstream 41590 8707739 ~ 8712041 (+)
lyrm7 lyrm7 coding downstream 103635 8769784 ~ 8772389 (+)
cdc42se2 cdc42se2 coding downstream 108985 8775134 ~ 8849107 (+)
sptlc1 sptlc1 coding downstream 214905 8881054 ~ 8900229 (+)
ror2 ror2 coding downstream 234603 8900752 ~ 9028540 (+)
G362983 NA non-coding upstream 19571 8642161 ~ 8642388 (+)
G362981 NA non-coding upstream 20701 8641037 ~ 8641258 (+)
G362976 NA non-coding upstream 25146 8635733 ~ 8636813 (+)
G362963 NA non-coding upstream 65569 8596147 ~ 8596390 (+)
G362960 NA non-coding upstream 83541 8574992 ~ 8578418 (+)
G362996 NA non-coding downstream 2288 8668437 ~ 8670038 (+)
G362998 NA non-coding downstream 5836 8671985 ~ 8672557 (+)
G362999 NA non-coding downstream 6545 8672694 ~ 8672932 (+)
G363004 NA non-coding downstream 13136 8679285 ~ 8679577 (+)
G363005 NA non-coding downstream 15854 8682003 ~ 8682306 (+)
G362662 NA other upstream 742394 7918922 ~ 7919565 (+)
G362554 NA other upstream 969445 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 1472140 7185926 ~ 7189819 (+)
G361671 NA other upstream 2734033 5803828 ~ 5927926 (+)
G360985 NA other upstream 3362556 5296870 ~ 5299403 (+)
G364850 NA other downstream 562689 9228838 ~ 9229231 (+)
G365197 NA other downstream 1182554 9848703 ~ 9849154 (+)
G366748 NA other downstream 2310533 10976682 ~ 10977152 (+)
G366973 NA other downstream 2759493 11425642 ~ 11428710 (+)

Expression


Co-expression Network