Gene
RNA
| Item | Value |
|---|---|
| gene id | G364552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8707712 ~ 8714451 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 585A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU414433 | False | 320 | lncRNA | 0.38 | 2 | 8707712 | 8711968 |
| TU414436 | True | 379 | lncRNA | 0.43 | 2 | 8713518 | 8714451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523142 | LOC106571805 | coding | downstream | 478421 | 8206491 ~ 8229291 (-) |
| LOC110524943 | fbn2 | coding | downstream | 503194 | 7882389 ~ 8204518 (-) |
| LOC110523137 | pbx3 | coding | downstream | 985585 | 7593362 ~ 7722127 (-) |
| mvb12ba | mvb12b | coding | downstream | 1270793 | 7394813 ~ 7436919 (-) |
| LOC110523135 | lmx1b | coding | downstream | 1339915 | 7272318 ~ 7367797 (-) |
| hint1 | hint1 | coding | upstream | 46380 | 8760831 ~ 8765948 (-) |
| LOC110524946 | LOC106571878 | coding | upstream | 143166 | 8857617 ~ 8864575 (-) |
| syk | syk | coding | upstream | 430686 | 9145137 ~ 9199533 (-) |
| LOC110523157 | lyz2 | coding | upstream | 589193 | 9303644 ~ 9306869 (-) |
| LOC118964557 | lyz2 | coding | upstream | 604074 | 9318525 ~ 9321762 (-) |
| G364534 | NA | non-coding | downstream | 29583 | 8677793 ~ 8678129 (-) |
| G364532 | NA | non-coding | downstream | 34547 | 8672921 ~ 8673165 (-) |
| G364531 | NA | non-coding | downstream | 35275 | 8672237 ~ 8672437 (-) |
| G364528 | NA | non-coding | downstream | 37579 | 8663997 ~ 8670133 (-) |
| G364519 | NA | non-coding | downstream | 61212 | 8646161 ~ 8646500 (-) |
| G364555 | NA | non-coding | upstream | 6083 | 8720534 ~ 8720916 (-) |
| G364559 | NA | non-coding | upstream | 11341 | 8725792 ~ 8726490 (-) |
| G364572 | LOC106569275 | non-coding | upstream | 31146 | 8745597 ~ 8745819 (-) |
| G364643 | NA | non-coding | upstream | 131277 | 8845728 ~ 8900234 (-) |
| G364645 | sptlc1 | non-coding | upstream | 166607 | 8881058 ~ 8886121 (-) |
| G364322 | NA | other | downstream | 403529 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 1981732 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 2152997 | 6543675 ~ 6554715 (-) |
| LOC110523123 | LOC106572171 | other | downstream | 2753461 | 5945164 ~ 5954687 (-) |
| G361170 | NA | other | downstream | 3625844 | 5080578 ~ 5081868 (-) |
| G364754 | NA | other | upstream | 333091 | 9047542 ~ 9099000 (-) |
| G365752 | NA | other | upstream | 475218 | 9189669 ~ 9190098 (-) |
| G368612 | ctxn3 | other | upstream | 3419601 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 3991115 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 5492739 | 14207190 ~ 14208705 (-) |
