G364754


Basic Information

Item Value
gene id G364754
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9047542 ~ 9099000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU414654
GGCGAGGAATTGAGCAAAATACTTTTGACATTAACTGGCAAGTCCTGGACTGGGGATTGAAGGGATAACACCAAACTCATCATCCTTTATATTGACATTAGGACAAGATCACAAAGTTGGGAAGTGGTGGGTCCTCAGATCtagaaaaggttctacagctgcaccatcgagagcatctggtTGCATGGTATCTGGTTGCatcgcctggtatgacaactgctcggcccccaaccataaggcactacagagagtagtgcgtacggcccagtacatcactggggcacagcttcctgccatccaggacctctacaccaggcggtatcagaggaaggcccaaaacatttcaaagactccagccgccctagtcatagactgttctctctgctaccgcacggcaagcggtaccggagcaccaagtctaggtccaagaggcttcttaacagcttctacccacaagccataagactcctgaacatctaatcaaatggctacccagactatttgcattgcccccgccccccccacacacacacctcttttacaccgctgctactctctgttgttatcatctatgcatagtcactttaataactctacttgTACATATTACCcaaattacctccactaaccggtgcccccgcacattgactctgcgctggtacacccctgtatatagtctcactattgttattttactgctgctctttaattacttgttacttttatttcttattcttatttgtacTGCTtttttggttaggggctcgtaagtaagcatttcactgtaagggctacacctgttgtattccgcacatgtgactaataaaatgtgatttgattattTGATTTGACCAAGATACTGG
>TU414652
ACAGAGTTTGAGACAGAACTTTATTGTGATAGCTCTACAAAGGTTTCCTCTGTGATCTAGGAACAGATCCTTTTTCTCTAACATTCAAACATTAGAAAACACAGCGAACTTGGGAAGTGCATGGCTTTTATCATGTAGGGAATTTCGGGGACTATTCTTTTCTGCGTAATATTAAGGATCCAATCTCATCTCATCATATTTGCAAATTCTTAATTATTCTGATCTTCTGAATCACTGAGGAACAAACACTCGATGATGTTAACATACAGCAGACAGACCACATGTTGGGCACGACAACAAGGAAAGGCAACTCATGACATTAGAAACTGAAAAAAATAAAGTCATCATGCAGATTAGCAGTTCTGGTTATTAAATCAGCTGTAAAGTTGTTCTCTCCCTAACTTCTATCTCTGTCCGGATACAGTACTTTTATGTGACATCTCACGTCTCGGTTAGGACACCCCACTCCAGTTATAGAGAGGATGGTACTGCCTATATTGCCATCTTATGGGAATCTGACAGAAGCAGTGAAAGGAGGAGAACTGAAGGTAGCCATTTGCGATTGCTCTTGATTGGCCCAGGGTGGCGTTTACTCCACCTTGATAGGCCCAGGGTGAACGTTTACTCTCCCTTGATTGGCCCAGGGTGAACGTTTACTCCACCTTGATTGGCCCAGGGTGGCGTTTACTCTCCCTTGAAGCGAGGAGGCCTCTTCTCCTTGAACGCAGCCAGTCCCTCCAGCCTGTCTTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU414654 False 863 TUCP 0.46 2 9047542 9050708
TU414652 True 752 lncRNA 0.44 2 9098163 9099000

Neighbor

gene id symbol gene type direction distance location
LOC110524946 LOC106571878 coding downstream 233588 8857617 ~ 8864575 (-)
hint1 hint1 coding downstream 332215 8760831 ~ 8765948 (-)
LOC110523142 LOC106571805 coding downstream 868872 8206491 ~ 8229291 (-)
LOC110524943 fbn2 coding downstream 893645 7882389 ~ 8204518 (-)
LOC110523137 pbx3 coding downstream 1376036 7593362 ~ 7722127 (-)
syk syk coding upstream 46137 9145137 ~ 9199533 (-)
LOC110523157 lyz2 coding upstream 204644 9303644 ~ 9306869 (-)
LOC118964557 lyz2 coding upstream 219525 9318525 ~ 9321762 (-)
LOC118964743 LOC106572855 coding upstream 223914 9322914 ~ 9324963 (-)
lyz2 lyz2 coding upstream 231805 9330805 ~ 9333401 (-)
G364756 NA non-coding downstream 7825 9089923 ~ 9090338 (-)
G364768 NA non-coding downstream 22664 9074667 ~ 9075499 (-)
G364751 NA non-coding downstream 62426 9035456 ~ 9035737 (-)
G364750 NA non-coding downstream 63511 9034429 ~ 9034652 (-)
G364749 NA non-coding downstream 64052 9033909 ~ 9034111 (-)
G364782 NA non-coding upstream 14337 9113337 ~ 9113572 (-)
G364783 NA non-coding upstream 15781 9114781 ~ 9114983 (-)
G364793 NA non-coding upstream 34268 9133268 ~ 9133473 (-)
G364795 NA non-coding upstream 38994 9137994 ~ 9138252 (-)
G364796 NA non-coding upstream 40626 9139626 ~ 9139890 (-)
G364754 NA other downstream 47455 9047542 ~ 9099000 (-)
G364322 NA other downstream 793980 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 2372183 6562531 ~ 6726634 (-)
G363470 LOC106572095 other downstream 2543448 6543675 ~ 6554715 (-)
LOC110523123 LOC106572171 other downstream 3143912 5945164 ~ 5954687 (-)
G365752 NA other upstream 90669 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 3035052 12134052 ~ 12136790 (-)
G368921 NA other upstream 3606566 12705566 ~ 12706092 (-)
G370333 NA other upstream 5108190 14207190 ~ 14208705 (-)
G370635 NA other upstream 5328338 14427338 ~ 14428591 (-)
G364722 NA non-coding downstream 19771 9025699 ~ 9027771 (-)
G364744 NA non-coding downstream 22938 9023749 ~ 9024604 (-)
G361170 NA other downstream 3965674 5080578 ~ 5081868 (-)

Expression


Co-expression Network