G365734


Basic Information

Item Value
gene id G365734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9151858 ~ 9152744 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU415752
cctaactcatcaattaagacctagacaaccaggtgaagggagttTCGTACtcatcaattaagacctagacaaccagctgaggggagttcctaactcatcaattaagacctagacaaccagatgaggggagttcctaactcatcaactgagacctagacaaccaggtgaggggagttcctaactcatcaattaagacctagacaagcAGGTGAAGGGAGTTTCGTACtcatcaattaagacctagacaaccagctgggggggagttcctaactcatcaactgagacctagacaaccaggtgaggggagttcttaactcatcaattaagacctagacaaccagatgaggggagttcctaactcatcaattaagacctagacaaccaggtgaggggagttcctaactcataatttaagacctagacaaccaggtgagtggAGTTCCTAACtcatcaattaagacctagacaaccaggtgagaggagttcctAACTTATCAattgagacctagacaaccaggtgaggggagttcctaactcatcaattaagacctagacaaccagccgaggggagttcctaactcatcaattaagacctagacaaccaggtgaggggagttcctaactcaTCAGGgaccttaattaatcaatcaagtagaagggaggagc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU415752 True 666 lncRNA 0.45 2 9151858 9152744

Neighbor

gene id symbol gene type direction distance location
LOC110524946 LOC106571878 coding downstream 287283 8857617 ~ 8864575 (-)
hint1 hint1 coding downstream 385910 8760831 ~ 8765948 (-)
LOC110523142 LOC106571805 coding downstream 922567 8206491 ~ 8229291 (-)
LOC110524943 fbn2 coding downstream 947340 7882389 ~ 8204518 (-)
LOC110523137 pbx3 coding downstream 1429731 7593362 ~ 7722127 (-)
LOC110523157 lyz2 coding upstream 150900 9303644 ~ 9306869 (-)
LOC118964557 lyz2 coding upstream 165781 9318525 ~ 9321762 (-)
LOC118964743 LOC106572855 coding upstream 170170 9322914 ~ 9324963 (-)
lyz2 lyz2 coding upstream 178061 9330805 ~ 9333401 (-)
macir cssa01h5orf30 coding upstream 202477 9355221 ~ 9361224 (-)
G364798 NA non-coding downstream 10670 9140894 ~ 9141188 (-)
G364796 NA non-coding downstream 11968 9139626 ~ 9139890 (-)
G364795 NA non-coding downstream 13606 9137994 ~ 9138252 (-)
G364793 NA non-coding downstream 18385 9133268 ~ 9133473 (-)
G364783 NA non-coding downstream 36875 9114781 ~ 9114983 (-)
G365745 NA non-coding upstream 28100 9180844 ~ 9181052 (-)
G365756 NA non-coding upstream 40943 9193687 ~ 9193937 (-)
G365729 diras2 non-coding upstream 47754 9200498 ~ 9203849 (-)
G365762 NA non-coding upstream 59687 9212431 ~ 9213193 (-)
G365775 NA non-coding upstream 76105 9228849 ~ 9229239 (-)
G364754 NA other downstream 101150 9047542 ~ 9099000 (-)
G364322 NA other downstream 847675 8303267 ~ 8304183 (-)
LOC110524941 LOC106572051 other downstream 2425878 6562531 ~ 6726634 (-)
G363470 LOC106572095 other downstream 2597143 6543675 ~ 6554715 (-)
LOC110523123 LOC106572171 other downstream 3197607 5945164 ~ 5954687 (-)
G365752 NA other upstream 36925 9189669 ~ 9190098 (-)
G368612 ctxn3 other upstream 2981308 12134052 ~ 12136790 (-)
G368921 NA other upstream 3552822 12705566 ~ 12706092 (-)
G370333 NA other upstream 5054446 14207190 ~ 14208705 (-)
G370635 NA other upstream 5274594 14427338 ~ 14428591 (-)

Expression


Co-expression Network