G364871


Basic Information

Item Value
gene id G364871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9266317 ~ 9266726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU414781
cctcagccatgttaccacctcagccatgttaccacctcagccatgttcccatgttcccacctcagccatgttaccaccCCAGCCATGTTCCcatgttaccacctcagccatgttaccacctcagccatgttcccacctcagccatgttcccatgttaccacctcagccatgttaccacctcagccatgttaccacctcagccatgttaccaccCCAGCCATGTTACCACCTCAGACATGTTCCACACTCCCCCTCTAACTAGCAGTCTGGCTTGCTAGTAGCAGCAATTGCTCACTAATTGACAGCTCCTGCACCCACGGCTTAACCTCCAAGTCTCAGTTGGCCATTTCATCCACAATAATGTTCGTTCTAATTGCAGTGTCTAGTTAAAAATGCTCACGCACCAATGT

Function

NR:

description
PREDICTED: splicing factor 3A subunit 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU414781 True 410 lncRNA 0.51 1 9266317 9266726

Neighbor

gene id symbol gene type direction distance location
LOC110523155 diras2 coding upstream 62463 9198915 ~ 9203854 (+)
auh auh coding upstream 167315 9048724 ~ 9099002 (+)
nfil3 nfil3 coding upstream 219592 9041049 ~ 9046725 (+)
ror2 ror2 coding upstream 237777 8900752 ~ 9028540 (+)
pdzph1 LOC106571915 coding downstream 20331 9287057 ~ 9303171 (+)
st8sia4 LOC100135820 coding downstream 393086 9659812 ~ 9677491 (+)
LOC110522837 tmem217 coding downstream 423783 9690509 ~ 9691996 (+)
chd1 chd1 coding downstream 427322 9694048 ~ 9731133 (+)
LOC118964774 NA coding downstream 445025 9711751 ~ 9711969 (+)
G364870 NA non-coding upstream 1473 9264489 ~ 9264844 (+)
G364869 NA non-coding upstream 7015 9259011 ~ 9259302 (+)
G364856 NA non-coding upstream 24605 9241255 ~ 9241712 (+)
G364854 NA non-coding upstream 27317 9238787 ~ 9239000 (+)
G364836 NA non-coding upstream 53235 9212640 ~ 9213082 (+)
G364876 NA non-coding downstream 13567 9280293 ~ 9280528 (+)
G364879 NA non-coding downstream 18548 9285274 ~ 9285684 (+)
G364880 NA non-coding downstream 19038 9285764 ~ 9286110 (+)
G364881 NA non-coding downstream 19514 9286240 ~ 9286857 (+)
G364882 NA non-coding downstream 36916 9303642 ~ 9378722 (+)
G364850 NA other upstream 37086 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 420201 8775134 ~ 8849107 (+)
G362662 NA other upstream 1346752 7918922 ~ 7919565 (+)
G362554 NA other upstream 1573803 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2076498 7185926 ~ 7189819 (+)
G365197 NA other downstream 581977 9848703 ~ 9849154 (+)
G366748 NA other downstream 1709956 10976682 ~ 10977152 (+)
G366973 NA other downstream 2158916 11425642 ~ 11428710 (+)
G367684 NA other downstream 2611603 11878329 ~ 11880035 (+)
G368440 NA other downstream 3841970 13108696 ~ 13109134 (+)

Expression


Co-expression Network