G364880


Basic Information

Item Value
gene id G364880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9285764 ~ 9286110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU414790
cgctgaccctcaacacgtgggcctctcaggggtgcgtgcttagtgccctcttgtactccctgttcacccatgactgcatggtcaCACacaattccaacaccatcatcaagtctgctgacgacacgacagtggtaggcctgatcgccgatgacagcctacagggaggaggtcaaagacttgccagtgtggtgccaggacgacaacctctccctcaacatcagttagaccaagaagctgatcgtggactaaaggaggaagagggaagatcAAGCacccatccacattgatgggactgtagtggagcgatttgaaagcttcaagttacttggcgtacacatcactaagAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU414790 True 347 lncRNA 0.52 1 9285764 9286110

Neighbor

gene id symbol gene type direction distance location
LOC110523155 diras2 coding upstream 81910 9198915 ~ 9203854 (+)
auh auh coding upstream 186762 9048724 ~ 9099002 (+)
nfil3 nfil3 coding upstream 239039 9041049 ~ 9046725 (+)
ror2 ror2 coding upstream 257224 8900752 ~ 9028540 (+)
pdzph1 LOC106571915 coding downstream 947 9287057 ~ 9303171 (+)
st8sia4 LOC100135820 coding downstream 373702 9659812 ~ 9677491 (+)
LOC110522837 tmem217 coding downstream 404399 9690509 ~ 9691996 (+)
chd1 chd1 coding downstream 407938 9694048 ~ 9731133 (+)
LOC118964774 NA coding downstream 425641 9711751 ~ 9711969 (+)
G364879 NA non-coding upstream 80 9285274 ~ 9285684 (+)
G364876 NA non-coding upstream 5236 9280293 ~ 9280528 (+)
G364871 NA non-coding upstream 19038 9266317 ~ 9266726 (+)
G364870 NA non-coding upstream 20920 9264489 ~ 9264844 (+)
G364869 NA non-coding upstream 26462 9259011 ~ 9259302 (+)
G364881 NA non-coding downstream 130 9286240 ~ 9286857 (+)
G364882 NA non-coding downstream 17532 9303642 ~ 9378722 (+)
G364905 NA non-coding downstream 50946 9337056 ~ 9345277 (+)
G364936 NA non-coding downstream 93920 9380030 ~ 9381271 (+)
G364939 NA non-coding downstream 99748 9385858 ~ 9411484 (+)
G364850 NA other upstream 56533 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 439648 8775134 ~ 8849107 (+)
G362662 NA other upstream 1366199 7918922 ~ 7919565 (+)
G362554 NA other upstream 1593250 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2095945 7185926 ~ 7189819 (+)
G365197 NA other downstream 562593 9848703 ~ 9849154 (+)
G366748 NA other downstream 1690572 10976682 ~ 10977152 (+)
G366973 NA other downstream 2139532 11425642 ~ 11428710 (+)
G367684 NA other downstream 2592219 11878329 ~ 11880035 (+)
G368440 NA other downstream 3822586 13108696 ~ 13109134 (+)

Expression


Co-expression Network