G364934


Basic Information

Item Value
gene id G364934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9453804 ~ 9454180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU414870
aaaaggctaattgatcattagaaaacccttttgcaattgttagccAATTGGGCCCCaatactcctctttctattctggttgcagccagtttgcgctgttctgtgaaggtagtacacagtgttgtacgaaatcttcagtttcttggcaatttctcaaattgaatagccttcatttctcagaacatagtctgacaagtttcagaagaaatttctttgtttctggccattttaagcctgtaaacaaaaccacaaatgctagtctaaagaaggacagttttattgcttctttaatcaggacaacagttttcagctgtgctaacataattgaaaaagggttttctaatgatcaattagcctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU414870 True 357 lncRNA 0.36 2 9453804 9454180

Neighbor

gene id symbol gene type direction distance location
pdzph1 LOC106571915 coding upstream 150633 9287057 ~ 9303171 (+)
LOC110523155 diras2 coding upstream 249950 9198915 ~ 9203854 (+)
auh auh coding upstream 354802 9048724 ~ 9099002 (+)
nfil3 nfil3 coding upstream 407079 9041049 ~ 9046725 (+)
trnas-uga NA coding upstream 510659 8943072 ~ 8943145 (+)
st8sia4 LOC100135820 coding downstream 205632 9659812 ~ 9677491 (+)
LOC110522837 tmem217 coding downstream 236329 9690509 ~ 9691996 (+)
chd1 chd1 coding downstream 239868 9694048 ~ 9731133 (+)
LOC118964774 NA coding downstream 257571 9711751 ~ 9711969 (+)
LOC118964779 NA coding downstream 271258 9725438 ~ 9725565 (+)
G364935 NA non-coding upstream 136 9453300 ~ 9453668 (+)
G364943 NA non-coding upstream 6785 9446429 ~ 9447019 (+)
G364941 ppip5k2 non-coding upstream 41837 9386455 ~ 9411967 (+)
G364939 NA non-coding upstream 42320 9385858 ~ 9411484 (+)
G364936 NA non-coding upstream 72533 9380030 ~ 9381271 (+)
G364932 NA non-coding downstream 177 9454357 ~ 9455065 (+)
G365001 NA non-coding downstream 23746 9477926 ~ 9481000 (+)
G364942 pam non-coding downstream 57503 9511683 ~ 9515139 (+)
G365093 NA non-coding downstream 181008 9635188 ~ 9686962 (+)
G365109 NA non-coding downstream 224794 9678974 ~ 9681569 (+)
G364850 NA other upstream 224573 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 607688 8775134 ~ 8849107 (+)
G362662 NA other upstream 1534239 7918922 ~ 7919565 (+)
G362554 NA other upstream 1761290 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2263985 7185926 ~ 7189819 (+)
G365197 NA other downstream 394523 9848703 ~ 9849154 (+)
G366748 NA other downstream 1522502 10976682 ~ 10977152 (+)
G366973 NA other downstream 1971462 11425642 ~ 11428710 (+)
G367684 NA other downstream 2424149 11878329 ~ 11880035 (+)
G368440 NA other downstream 3654516 13108696 ~ 13109134 (+)

Expression


Co-expression Network