G365175



Basic Information


Item Value
gene id G365175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9802618 ~ 9802835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU415124
taattggggagtttctcccattcttctctgcagatcctctcgagctctgtcaggttggatggggagtgttgctgcacagctattttcaggtctctccagagatgttcaattttgttcaagtctgggctctggctgggccactcaaggacattcagaaaattgtcctgaagccactcctgtgttgtcttggctgtgtgcttagggcctttgtcctgttg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU415124 True 218 lncRNA 0.50 1 9802618 9802835

Neighbor


gene id symbol gene type direction distance location
dcp2 dcp2 coding upstream 4795 9782455 ~ 9797823 (+)
chd1 chd1 coding upstream 71485 9694048 ~ 9731133 (+)
LOC118964779 NA coding upstream 77053 9725438 ~ 9725565 (+)
LOC118964774 NA coding upstream 90649 9711751 ~ 9711969 (+)
LOC110522837 tmem217 coding upstream 110622 9690509 ~ 9691996 (+)
ca9 LOC106571618 coding downstream 7889 9810724 ~ 9834173 (+)
LOC110523166 LOC106571594 coding downstream 67792 9870627 ~ 9874229 (+)
LOC110523169 NA coding downstream 306037 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 459870 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 480165 10283000 ~ 10300246 (+)
G365077 reep5 non-coding upstream 27041 9774865 ~ 9775577 (+)
G365093 NA non-coding upstream 115656 9635188 ~ 9686962 (+)
G365109 NA non-coding upstream 121049 9678974 ~ 9681569 (+)
G364942 pam non-coding upstream 287479 9511683 ~ 9515139 (+)
G365001 NA non-coding upstream 321618 9477926 ~ 9481000 (+)
G365190 NA non-coding downstream 37740 9840575 ~ 9840959 (+)
G365194 NA non-coding downstream 43357 9846192 ~ 9846403 (+)
G365195 NA non-coding downstream 44039 9846874 ~ 9847079 (+)
G365196 NA non-coding downstream 45245 9848080 ~ 9848292 (+)
G364850 NA other upstream 573387 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 956502 8775134 ~ 8849107 (+)
G362662 NA other upstream 1883053 7918922 ~ 7919565 (+)
G362554 NA other upstream 2110104 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2612799 7185926 ~ 7189819 (+)
G365197 NA other downstream 45868 9848703 ~ 9849154 (+)
G366748 NA other downstream 1173847 10976682 ~ 10977152 (+)
G366973 NA other downstream 1622807 11425642 ~ 11428710 (+)
G367684 NA other downstream 2075494 11878329 ~ 11880035 (+)
G368440 NA other downstream 3305861 13108696 ~ 13109134 (+)

Expression



Co-expression Network