G365194


Basic Information

Item Value
gene id G365194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9846192 ~ 9846403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU415147
gacatagacacactggctttactcaaggccAGTGAAATGAccttagtaaagattgaaaaaaagtaaggggcctagacagctgccctggggaatttctgattctacctggattatgttggagaggcttccattaaagaacaccctctgtgttctgttagacaggtgactctttatccacaatatagcagggtgtgaaaagccataacatacag

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU415147 True 212 lncRNA 0.43 1 9846192 9846403

Neighbor

gene id symbol gene type direction distance location
ca9 LOC106571618 coding upstream 12019 9810724 ~ 9834173 (+)
dcp2 dcp2 coding upstream 48369 9782455 ~ 9797823 (+)
chd1 chd1 coding upstream 115059 9694048 ~ 9731133 (+)
LOC110523166 LOC106571594 coding downstream 24224 9870627 ~ 9874229 (+)
LOC110523169 NA coding downstream 262469 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 416302 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 436597 10283000 ~ 10300246 (+)
slc38a9 slc38a9 coding downstream 494829 10341232 ~ 10366701 (+)
G365190 NA non-coding upstream 5233 9840575 ~ 9840959 (+)
G365175 NA non-coding upstream 43357 9802618 ~ 9802835 (+)
G365077 reep5 non-coding upstream 70615 9774865 ~ 9775577 (+)
G365093 NA non-coding upstream 159230 9635188 ~ 9686962 (+)
G365195 NA non-coding downstream 471 9846874 ~ 9847079 (+)
G365196 NA non-coding downstream 1677 9848080 ~ 9848292 (+)
G365202 NA non-coding downstream 4740 9851143 ~ 9851352 (+)
G365205 NA non-coding downstream 8343 9854746 ~ 9858120 (+)
G365218 NA non-coding downstream 24465 9870868 ~ 9871159 (+)
G364850 NA other upstream 616961 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 1000076 8775134 ~ 8849107 (+)
G362662 NA other upstream 1926627 7918922 ~ 7919565 (+)
G362554 NA other upstream 2153678 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2656373 7185926 ~ 7189819 (+)
G365197 NA other downstream 2300 9848703 ~ 9849154 (+)
G366748 NA other downstream 1130279 10976682 ~ 10977152 (+)
G366973 NA other downstream 1579239 11425642 ~ 11428710 (+)
G367684 NA other downstream 2031926 11878329 ~ 11880035 (+)
G368440 NA other downstream 3262293 13108696 ~ 13109134 (+)

Expression


Co-expression Network