G365196


Basic Information

Item Value
gene id G365196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9848080 ~ 9848292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU415149
CCACTGCTTtaaaccagggcaaggtgaccggaaacatgaccgaatacaaacagtgtagctattccctccgcaaggcaatcaaacaagctaagcttcAGTATAGACACAaggtagagttgcaattcaatggctcagacacaagaggtatgtggcagggtctacagtcaatcacagattacaaaaagaaaaccagccccgtcgcggaccaggatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU415149 True 213 lncRNA 0.47 1 9848080 9848292

Neighbor

gene id symbol gene type direction distance location
ca9 LOC106571618 coding upstream 13907 9810724 ~ 9834173 (+)
dcp2 dcp2 coding upstream 50257 9782455 ~ 9797823 (+)
chd1 chd1 coding upstream 116947 9694048 ~ 9731133 (+)
LOC110523166 LOC106571594 coding downstream 22335 9870627 ~ 9874229 (+)
LOC110523169 NA coding downstream 260580 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 414413 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 434708 10283000 ~ 10300246 (+)
slc38a9 slc38a9 coding downstream 492940 10341232 ~ 10366701 (+)
G365195 NA non-coding upstream 1001 9846874 ~ 9847079 (+)
G365194 NA non-coding upstream 1677 9846192 ~ 9846403 (+)
G365190 NA non-coding upstream 7121 9840575 ~ 9840959 (+)
G365175 NA non-coding upstream 45245 9802618 ~ 9802835 (+)
G365202 NA non-coding downstream 2851 9851143 ~ 9851352 (+)
G365205 NA non-coding downstream 6454 9854746 ~ 9858120 (+)
G365218 NA non-coding downstream 22576 9870868 ~ 9871159 (+)
G365223 NA non-coding downstream 30239 9878531 ~ 9878767 (+)
G365199 NA non-coding downstream 30970 9879262 ~ 9881261 (+)
G364850 NA other upstream 618849 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 1001964 8775134 ~ 8849107 (+)
G362662 NA other upstream 1928515 7918922 ~ 7919565 (+)
G362554 NA other upstream 2155566 7690440 ~ 7692514 (+)
G362297 zbtb43 other upstream 2658261 7185926 ~ 7189819 (+)
G365197 NA other downstream 411 9848703 ~ 9849154 (+)
G366748 NA other downstream 1128390 10976682 ~ 10977152 (+)
G366973 NA other downstream 1577350 11425642 ~ 11428710 (+)
G367684 NA other downstream 2030037 11878329 ~ 11880035 (+)
G368440 NA other downstream 3260404 13108696 ~ 13109134 (+)

Expression


Co-expression Network