G365205


Basic Information

Item Value
gene id G365205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 9854746 ~ 9858120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU415170
CCCATTTGGCAGATTTATTGATACATTCTTTATACCATTATAGGATCATAATAGTTAATTGATCAAAATCCCTATAAGCATCAATGATGAGGAATTCACATGCAAAGATGGATTGGTGGCTTAGGTAATCAAATAGGAAGTAGTATAATCAGAATTAAATACAGAATTTTGGAAATTGAGTCAACTCAGACAATACAACAAGACAAGACATTTTGGTATCGAGCAAACATTCTCCCTCATTCTTCGGAGGTAGATTCCCAGTTTCTGCCTTCCCAACATGTTATCAGCACAAAACAATGACAGCGAATGTGCTGGAATTCCAACAACATGAAATAAGCAACATTCGATGAAATCCATCTCCTGACAATCCGCTCGGTGTGACTTAGCAATTGTTGGGGACCCATGGTCCACTAACACTCCTACACAGACGTGAGTAAGACCACCGTATACAACACAAATAAAACATACATGGAAACATCATTGGAAAGATTGTGGCGGCGTATGCCACGTGTCAGGGATTTTAAAAACCGTTGTAGATGTGCACAATCTTAGGAGTGCTGGATCGCCCAGTGGGATTTGTCCACAATGtgagtgctggtgtgtgtgtggtcacttcAGTGTGACTTCACAACGAGGTAGCGCTGCCATCTCTCAGCGTAGTCAGGAACACGGTTCTTGATTTACACTACGTCCCAAacgtcaccctattccctttgtagtgcactacttatgaccagggcccataaggatctagccataagtagtgcactacctggGAACAGGGTGATGTTTGGGGCACAAACTGTATTGCAGGCTTGTTTGAGCTGGTGCCTGGCGGTTGGCAATGGTTTCTGGCTGAACAATGGTTCACCAACCAAACTAcgcaaagaaaataaaaaagaccTTGGCACCTCTCCATTGCTCGACTGATAAACAAGTCTACCAAACCATTAAccttttgccccccccccctccccccagtatTAAGAGAGCACCCGTCAATCACACTTACAACACGGGTACATATGCAGAAAGCAAGCcatcaaaaaatacattttaaaaaaagaagaaaactACAATAATGAAATCAATGGAGGACCTGCATTGACGTGGCTGTATATGTCAGAAAACCCTGCCGTCCATCAATAGTTCTTGAAATGATATATTAGAAAACCCTGTCGTCCATCAACTGTGGAGACTTTAATGTATTGGGGTGAGCCGAGCCCATCTCAACTCTTTCATTAGGAAAGCTGGTGAAATTATGGGTTTAAATGGAGTAACTGGCCAATTGGGGATCCTAACTAACTCGAGCCATTCAAAATGGCAACATCGAGACTAATTCCCTTTGGAACCGTGCTTGAAAAGACAGTTAGTGTGAAAAGAAAATACCAGAGCGAAGGCTTTTTTTTagtacaattttttattttatttttttacccctttttctccccaatttcgtggtatccaattgtttagtagctactatcttccggaagccagccgcaccaatgtgtcggaagaaacacagtgcacctggcaaccttggtttagcgcgcactgcgcccagcccgccacaggagtcgctggtgcgcgatgagacaaggatttccttaccggccaaaccctccctaacccgggcgacgctaggccaattgtgcgtcgccccacggacctcccggtcgcggccggttacgacagagcctgggcgcgaacccagagtctctggtggcacatttGGTATCTGTACTGCAGCGCaattaaccactgcgccacccgggaggccctgaaaGGCTATTTTTAAGCAAAAAGGCACaaggggggtgtggtatatggccaatatatggtatatggccaatatatggtgtatggccaatatatggtatatggccaatataccacagctaaggggtGTTCTTAGGCACCACGCAAAGCAGAgcccatataccacaaacccccgaggtgctttattgctattataaactggtaatCAAAGTAATTAGaggagtaaaaatacatgttttgtcatacccgtggctgtcggccaatcagcattcatgcctcgaaccacccagtttataaaacgCTGTATGCAACAAGCTGTCGTCTTAACAAGTATTGTCCAAGACACTTGGCCAAGCAGCTTTTgtggtaaaatacaaaaaaaggtcAATTTACAAGGGTCAATCAAATCGCAGGTTTTAGACAACTCAGCTTTTAAAGGCAACGTTCCCGCTGTTCGCAGAGATCGCATTCATGGTAAACACTGCATGTTGGCTCAAACAGAAATTGCCTTTAAAAGCCACCAGGGCCTATATGGTGCTGATCTGAGATCAGGTCTTCCCTGTCCATATAATCCTATTCATTATGATCCAAaagacaaaactgatcctagatcagcagaagtcctactctgagacactttgtgatgACCcagaggtttaaaaaaaaaaagaagatacaAAACTCTATGGTATTGCTGCCGATGGTAGTAATAATTATTTTTACTCTATAACCACTCAGTTGTAGAGTAAAAAAGGCCACCGTTTAGTGACTGACCATAACACTATTAGAGTACggtcatattcattagtgcacaccgtagaaaaacgttttgcaacaaaaaCGAGTTTCTTATTGGTTCAGGTAGTCCCGCATCGTTTAGTGTCTAGTGAATATGATTCCGTCGTCTTTTTCACCTGTATTTGGTGGATCAAGGTCAAGAACATTAGCATTTTATTTgcataataaaaacataaaaatacCTTACATAATATGTACCAGtgggggctgctgaggggaggatggctcatattGTCTGGAATGGAGCtaaatggaacggcatcaaacatTTAGTTTGATGTATCTGAAAACATTCCACTGATTCAGCGTTAGCCATTACCACtagcccgtcctccccaaataaggtgccaccaacctcctgtgatgtgtaCATGTGTCCTACACATGGCAGTGTCTGCCAGGGCAGATAATGCATAATATAGTGATGTTGCATACCgttgtatgtgtgtataataGGGTTTTCCAAACTAGGGGATTTGAAAATGGGAGTCACGATCGATAATTGGTGATTGGTTCATAGAACCTGGCTTAAAATCAGTTTTCTTCCAAGGTTCTTTTCTACACAGATCATCATACATTATTGCCTGATGATCTTCTGCATTTCCTAATACATTTCAGTCAATTCAAACCATATGGTTTTCAGATTAAAATACAGTCAAAAatactgtcagactgatttgtaaGACTGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU415170 True 3270 lncRNA 0.43 2 9854746 9858120

Neighbor

gene id symbol gene type direction distance location
ca9 LOC106571618 coding upstream 20573 9810724 ~ 9834173 (+)
dcp2 dcp2 coding upstream 56923 9782455 ~ 9797823 (+)
chd1 chd1 coding upstream 123613 9694048 ~ 9731133 (+)
LOC110523166 LOC106571594 coding downstream 12507 9870627 ~ 9874229 (+)
LOC110523169 NA coding downstream 250752 10108872 ~ 10124536 (+)
ankrd55 ankrd55 coding downstream 404585 10262705 ~ 10281350 (+)
gp130 gp130 coding downstream 424880 10283000 ~ 10300246 (+)
slc38a9 slc38a9 coding downstream 483112 10341232 ~ 10366701 (+)
G365202 NA non-coding upstream 3394 9851143 ~ 9851352 (+)
G365196 NA non-coding upstream 6454 9848080 ~ 9848292 (+)
G365195 NA non-coding upstream 7667 9846874 ~ 9847079 (+)
G365194 NA non-coding upstream 8343 9846192 ~ 9846403 (+)
G365190 NA non-coding upstream 13787 9840575 ~ 9840959 (+)
G365218 NA non-coding downstream 12748 9870868 ~ 9871159 (+)
G365223 NA non-coding downstream 20411 9878531 ~ 9878767 (+)
G365199 NA non-coding downstream 21142 9879262 ~ 9881261 (+)
G365198 NA non-coding downstream 27194 9885314 ~ 9911145 (+)
G365233 NA non-coding downstream 53265 9911385 ~ 9911700 (+)
G365197 NA other upstream 5592 9848703 ~ 9849154 (+)
G364850 NA other upstream 625515 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 1008630 8775134 ~ 8849107 (+)
G362662 NA other upstream 1935181 7918922 ~ 7919565 (+)
G362554 NA other upstream 2162232 7690440 ~ 7692514 (+)
G366748 NA other downstream 1118562 10976682 ~ 10977152 (+)
G366973 NA other downstream 1567522 11425642 ~ 11428710 (+)
G367684 NA other downstream 2020209 11878329 ~ 11880035 (+)
G368440 NA other downstream 3250576 13108696 ~ 13109134 (+)
G369763 NA other downstream 3907127 13765247 ~ 13769296 (+)

Expression


Co-expression Network