Gene
RNA
| Item | Value |
|---|---|
| gene id | G366107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 9870418 ~ 9870643 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU416171 | True | 226 | lncRNA | 0.45 | 1 | 9870418 | 9870643 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:114200 | LOC106571615 | coding | downstream | 1207 | 9857567 ~ 9869211 (-) |
| reep5 | reep5 | coding | downstream | 94861 | 9762915 ~ 9775557 (-) |
| LOC110522838 | NA | coding | downstream | 113433 | 9755287 ~ 9756985 (-) |
| LOC118964744 | NA | coding | downstream | 245679 | 9623770 ~ 9624739 (-) |
| pam | pam | coding | downstream | 259868 | 9454461 ~ 9610550 (-) |
| tpm2 | LOC106571564 | coding | upstream | 8606 | 9879249 ~ 9911220 (-) |
| tln1 | LOC100380665 | coding | upstream | 41369 | 9912012 ~ 10059149 (-) |
| hmgcs1 | LOC106571543 | coding | upstream | 198234 | 10068877 ~ 10083381 (-) |
| map3k1 | map3k1 | coding | upstream | 256625 | 10127268 ~ 10180089 (-) |
| LOC110523172 | il31r | coding | upstream | 432998 | 10303641 ~ 10318088 (-) |
| G366097 | NA | non-coding | downstream | 20633 | 9849459 ~ 9849785 (-) |
| G366077 | NA | non-coding | downstream | 58916 | 9810924 ~ 9811502 (-) |
| G366019 | NA | non-coding | downstream | 147505 | 9721692 ~ 9722913 (-) |
| G365980 | NA | non-coding | downstream | 177068 | 9693128 ~ 9693350 (-) |
| G366123 | NA | non-coding | upstream | 47292 | 9917935 ~ 9918310 (-) |
| G366124 | NA | non-coding | upstream | 48199 | 9918842 ~ 9920142 (-) |
| G366140 | NA | non-coding | upstream | 100319 | 9970962 ~ 9971551 (-) |
| G366199 | NA | non-coding | upstream | 233367 | 10104010 ~ 10156606 (-) |
| G366215 | NA | non-coding | upstream | 252880 | 10123523 ~ 10124464 (-) |
| G365752 | NA | other | downstream | 680320 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 819710 | 9047542 ~ 9099000 (-) |
| G364322 | NA | other | downstream | 1566235 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 3144438 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 3315703 | 6543675 ~ 6554715 (-) |
| G368612 | ctxn3 | other | upstream | 2263409 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 2834923 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 4336547 | 14207190 ~ 14208705 (-) |
| G370635 | NA | other | upstream | 4556695 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 5122485 | 14988147 ~ 14995197 (-) |
