Gene
RNA
| Item | Value |
|---|---|
| gene id | G366302 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 10295022 ~ 10295694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106565965 isoform X11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU416392 | True | 294 | lncRNA | 0.45 | 3 | 10295022 | 10295694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| map3k1 | map3k1 | coding | downstream | 114933 | 10127268 ~ 10180089 (-) |
| hmgcs1 | LOC106571543 | coding | downstream | 211641 | 10068877 ~ 10083381 (-) |
| tln1 | LOC100380665 | coding | downstream | 235873 | 9912012 ~ 10059149 (-) |
| tpm2 | LOC106571564 | coding | downstream | 383802 | 9879249 ~ 9911220 (-) |
| zgc:114200 | LOC106571615 | coding | downstream | 425811 | 9857567 ~ 9869211 (-) |
| LOC110523172 | il31r | coding | upstream | 7947 | 10303641 ~ 10318088 (-) |
| ddx4 | vas | coding | upstream | 22542 | 10318236 ~ 10330434 (-) |
| sh2d4a | sh2d4a | coding | upstream | 79417 | 10375111 ~ 10395552 (-) |
| LOC118964559 | NA | coding | upstream | 173572 | 10469266 ~ 10475168 (-) |
| LOC110523178 | c209a | coding | upstream | 347163 | 10642857 ~ 10643948 (-) |
| G366279 | gp130 | non-coding | downstream | 10384 | 10282935 ~ 10284638 (-) |
| G366199 | NA | non-coding | downstream | 138416 | 10104010 ~ 10156606 (-) |
| G366215 | NA | non-coding | downstream | 170558 | 10123523 ~ 10124464 (-) |
| G366140 | NA | non-coding | downstream | 323471 | 9970962 ~ 9971551 (-) |
| G366124 | NA | non-coding | downstream | 374880 | 9918842 ~ 9920142 (-) |
| G366277 | NA | non-coding | upstream | 38074 | 10333768 ~ 10334422 (-) |
| G366314 | NA | non-coding | upstream | 104786 | 10400480 ~ 10420621 (-) |
| G366368 | NA | non-coding | upstream | 136947 | 10432641 ~ 10434070 (-) |
| G366472 | NA | non-coding | upstream | 277880 | 10573574 ~ 10575091 (-) |
| G366448 | NA | non-coding | upstream | 285634 | 10581328 ~ 10584712 (-) |
| G365752 | NA | other | downstream | 1104924 | 9189669 ~ 9190098 (-) |
| G364754 | NA | other | downstream | 1244314 | 9047542 ~ 9099000 (-) |
| G364322 | NA | other | downstream | 1990839 | 8303267 ~ 8304183 (-) |
| LOC110524941 | LOC106572051 | other | downstream | 3569042 | 6562531 ~ 6726634 (-) |
| G363470 | LOC106572095 | other | downstream | 3740307 | 6543675 ~ 6554715 (-) |
| G368612 | ctxn3 | other | upstream | 1838358 | 12134052 ~ 12136790 (-) |
| G368921 | NA | other | upstream | 2409872 | 12705566 ~ 12706092 (-) |
| G370333 | NA | other | upstream | 3911496 | 14207190 ~ 14208705 (-) |
| G370635 | NA | other | upstream | 4131644 | 14427338 ~ 14428591 (-) |
| LOC110524957 | LOC106569957 | other | upstream | 4697434 | 14988147 ~ 14995197 (-) |
