G366739 (ubxd6)


Basic Information

Item Value
gene id G366739
gene name ubxd6
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 10967326 ~ 10968081 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU416874
GCTGTAACAAAGGCCTAGGGTTGGCGACTACTGTTATACAAAATGGAATGCATGATTTGAATGAGTAATATTGGGATTGCCTGTTTGATACACAGTCACCTACATTCAGATGTTGATCGGGTGTTGGAAGAGAACAAAGACCTCAGGCGTGGATAAAAATATGACACCATCAAGGTAGACAGGCCCAACAGCAACAGACCTCGCCCCACCAATAGAAAGGCACCTCTCACATCGATTATTGAATGTTTCCAAGAAACAAAACAAAGTATTGATATTAACAAGGTCCCCAAAAGCCAAGATGTCTTTGACGAAGACATTTTATAATATCGTTCTCCAAGCTATCCCGTTTTTACTGCGTgtctttttttaatacatttttttttcttaaaatatTCTTCCGCGGTAAATATCTCAACCACAGCTAGAACCATGAGccagatatttcactggatgtataaat

Function

NR:

description
UBX domain-containing protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU416874 True 460 lncRNA 0.39 2 10967326 10968081

Neighbor

gene id symbol gene type direction distance location
ppp2cb LOC105021738 coding upstream 3604 10953016 ~ 10963722 (+)
LOC110523183 tex15 coding upstream 16125 10931536 ~ 10951201 (+)
purg purg coding upstream 38854 10920071 ~ 10928473 (+)
LOC110524950 fut10 coding upstream 311087 10654157 ~ 10656239 (+)
fut10 fut10 coding upstream 330241 10625909 ~ 10637085 (+)
LOC110523186 LOC106571348 coding downstream 6017 10974098 ~ 10984513 (+)
depdc1b depdc1b coding downstream 16639 10984720 ~ 11004641 (+)
LOC110523188 pde4d coding downstream 58020 11026101 ~ 11418933 (+)
LOC110524952 NA coding downstream 534562 11502643 ~ 11507284 (+)
LOC110523192 plk2 coding downstream 539608 11507689 ~ 11513262 (+)
G366684 NA non-coding upstream 14390 10952665 ~ 10952936 (+)
G366703 NA non-coding upstream 36957 10930074 ~ 10930369 (+)
G366704 NA non-coding upstream 37596 10929445 ~ 10929730 (+)
G366727 NA non-coding upstream 49529 10917595 ~ 10917797 (+)
G366678 NA non-coding downstream 36594 11004675 ~ 11005600 (+)
G366681 NA non-coding downstream 37653 11005734 ~ 11006030 (+)
G366766 NA non-coding downstream 44102 11012183 ~ 11012531 (+)
G366786 NA non-coding downstream 69970 11038051 ~ 11038367 (+)
G366797 NA non-coding downstream 81293 11049374 ~ 11051095 (+)
G365197 NA other upstream 1118172 9848703 ~ 9849154 (+)
G364850 NA other upstream 1738095 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2121210 8775134 ~ 8849107 (+)
G362662 NA other upstream 3047761 7918922 ~ 7919565 (+)
G362554 NA other upstream 3274812 7690440 ~ 7692514 (+)
G366748 NA other downstream 8601 10976682 ~ 10977152 (+)
G366973 NA other downstream 457561 11425642 ~ 11428710 (+)
G367684 NA other downstream 910248 11878329 ~ 11880035 (+)
G368440 NA other downstream 2140615 13108696 ~ 13109134 (+)
G369763 NA other downstream 2797166 13765247 ~ 13769296 (+)

Expression


Co-expression Network