G366678


Basic Information

Item Value
gene id G366678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11004675 ~ 11005600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU416807
gtcacttttattgtaaatatgaagaatagaatgtttctaaacacttctacattaatgtggatgctaccatgattattgATAGTGAATAATGatgaaagttacagatgcacaaatatcacaCCCCCAGAAATGCTAACCTCTCCtattattgtaatgttttttttttcttcatctttatttaaccaggtaggctagttgagaacaagttttcatttgcaactgcgacctggccaagataaagcatagcagtgtgaacagacaacagagttacacatggagtaaacaattaacaagtcgataacacagtagagaaaaaaaagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattaaaattttgcagattaacactggagtgataaatgatcagatggtcatgtacaggtagagatattggtgtgcaaaagagcagaaaagtaaataaatataaaccgtatggggatgaggtaggaaaattgtgtgggctatttaccgatagactatatACAGCTGctgtgatcggttagctgctcagatagcagatgtttgaagttggtgatggagataaaagtctccaacttcagcgatttttgcaatttgttccagtcacaggcagcagagaactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacgggtgggtgttgccatcgtgaccagtgaactgagataaatAAGAGGTTAACATGTCTTTGGGGAATGATATTTGTGTTTTTAAGTTTCTAACTcctcattattcatgattcattcaggattatccgtaatcatggggAGATCCACatttaatgtagaagtgtttagaaacattgtattcttatttacaataacagggactcaaataacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU416807 True 926 lncRNA 0.37 1 11004675 11005600

Neighbor

gene id symbol gene type direction distance location
depdc1b depdc1b coding upstream 34 10984720 ~ 11004641 (+)
LOC110523186 LOC106571348 coding upstream 20162 10974098 ~ 10984513 (+)
ppp2cb LOC105021738 coding upstream 40953 10953016 ~ 10963722 (+)
LOC110523183 tex15 coding upstream 53474 10931536 ~ 10951201 (+)
purg purg coding upstream 76203 10920071 ~ 10928473 (+)
LOC110523188 pde4d coding downstream 20501 11026101 ~ 11418933 (+)
LOC110524952 NA coding downstream 497043 11502643 ~ 11507284 (+)
LOC110523192 plk2 coding downstream 502089 11507689 ~ 11513262 (+)
trnaa-agc-2 NA coding downstream 595860 11601460 ~ 11601532 (+)
phax phax coding downstream 798320 11803920 ~ 11808076 (+)
G366739 ubxd6 non-coding upstream 36594 10967326 ~ 10968081 (+)
G366684 NA non-coding upstream 51739 10952665 ~ 10952936 (+)
G366703 NA non-coding upstream 74306 10930074 ~ 10930369 (+)
G366704 NA non-coding upstream 74945 10929445 ~ 10929730 (+)
G366681 NA non-coding downstream 134 11005734 ~ 11006030 (+)
G366766 NA non-coding downstream 6583 11012183 ~ 11012531 (+)
G366786 NA non-coding downstream 32451 11038051 ~ 11038367 (+)
G366797 NA non-coding downstream 43774 11049374 ~ 11051095 (+)
G366777 NA non-coding downstream 140683 11146283 ~ 11265997 (+)
G366748 NA other upstream 27523 10976682 ~ 10977152 (+)
G365197 NA other upstream 1155521 9848703 ~ 9849154 (+)
G364850 NA other upstream 1775444 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2158559 8775134 ~ 8849107 (+)
G362662 NA other upstream 3085110 7918922 ~ 7919565 (+)
G366973 NA other downstream 420042 11425642 ~ 11428710 (+)
G367684 NA other downstream 872729 11878329 ~ 11880035 (+)
G368440 NA other downstream 2103096 13108696 ~ 13109134 (+)
G369763 NA other downstream 2759647 13765247 ~ 13769296 (+)
G370360 NA other downstream 3250203 14255803 ~ 14259133 (+)

Expression


Co-expression Network